RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CHKAP35790 457 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 ZNF135P52742 658 aaPredicted RBP13.87□□□□□ -0.19
GPC6-201ENST00000377047 GTF2BQ00403 316 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 GRIK3Q13003 919 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 ITGA7Q13683 1181 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 TRIP4Q15650 581 aaPredicted RBP13.87□□□□□ -0.19
GPC6-201ENST00000377047 TMEM161BQ8NDZ6 487 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 OR56A4Q8NGH8 313 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 USP7Q93009 1102 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 TM6SF2Q9BZW4 377 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 KLHL28Q9NXS3 571 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 MAD2L1Q13257 205 aaPredicted RBP13.87□□□□□ -0.19
GPC6-201ENST00000377047 FBXW10Q5XX13 1052 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 NPNTQ6UXI9 565 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 KDM7AQ6ZMT4 941 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 HAS1Q92839 578 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 KAT5Q92993 513 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 VAT1Q99536 393 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 AASDHPPTQ9NRN7 309 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 CYP3A7-CYP3A51PA0A087WV96 503 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 ATP9AO75110 1047 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 IL1BP01584 269 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 KDELR1P24390 212 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 CYP3A7P24462 503 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 PEX5P50542 639 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 CNGA2Q16280 664 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 TTC33Q6PID6 262 aaPredicted RBP13.87□□□□□ -0.19
GPC6-201ENST00000377047 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 MAGEC3Q8TD91 643 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 ZNHIT2Q9UHR6 403 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 ZNF541Q9H0D2 1346 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 CLDN5O00501 218 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 RARAP10276 462 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 PSEN1P49768 467 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 CYP2A13Q16696 494 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 ANKRD23Q86SG2 305 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 ARL15Q9NXU5 204 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 RIC1Q4ADV7 1423 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 ELMO1Q92556 727 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 MLPHQ9BV36 600 aaPredicted RBP13.86□□□□□ -0.19
GPC6-201ENST00000377047 ZYG11BQ9C0D3 744 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 RERGLQ9H628 205 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 DDX28Q9NUL7 540 aaKnown RBP13.86□□□□□ -0.19
GPC6-201ENST00000377047 SNX13Q9Y5W8 968 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 A0A096LPK6 155 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 GLTPD2A6NH11 291 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 M0R3G1 203 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 DAB1O75553 588 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 GPR1P46091 355 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 SARSP49591 514 aaKnown RBP13.86□□□□□ -0.19
GPC6-201ENST00000377047 CLK2P49760 499 aaKnown RBP13.86□□□□□ -0.19
GPC6-201ENST00000377047 TOMM20Q15388 145 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 ANGPT1Q15389 498 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 MICU2Q8IYU8 434 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 NAALADL1Q9UQQ1 740 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 ANKRD6Q9Y2G4 727 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 BTBD19C9JJ37 291 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 MMP3P08254 477 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 UBTFL6P0CB48 400 aaPredicted RBP13.86□□□□□ -0.19
GPC6-201ENST00000377047 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
GPC6-201ENST00000377047 SSTR1P30872 391 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 UGCGQ16739 394 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 GLIS3Q8NEA6 775 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 APBB2Q92870 758 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 FAM50BQ9Y247 325 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 hCG_2014768A0A024R1R8 64 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 APOC4-APOC2K7ER74 178 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 APOC2P02655 101 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 PSMB4P28070 264 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 ABL2P42684 1182 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 RPL21P46778 160 aaKnown RBP13.86□□□□□ -0.19
GPC6-201ENST00000377047 METTL6Q8TCB7 284 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 SIGLEC16A6NMB1 481 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 CCT8P50990 548 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 TRAF2Q12933 501 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 RBM43Q6ZSC3 357 aaKnown RBP13.86□□□□□ -0.19
GPC6-201ENST00000377047 PIGZQ86VD9 579 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 GPSM1Q86YR5 675 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 CDK20Q8IZL9 346 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 NKX2-3Q8TAU0 364 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 DNAJC9Q8WXX5 260 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 BBS2Q9BXC9 721 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 ATP13A3Q9H7F0 1226 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 BPIFA1Q9NP55 256 aa13.86□□□□□ -0.19
GPC6-201ENST00000377047 GLUD1P00367 558 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 CRYMQ14894 314 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 TARBP2Q15633 366 aaKnown RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 PARP6Q2NL67 630 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 TTC7BQ86TV6 843 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 STK40Q8N2I9 435 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 ZNF786Q8N393 782 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 RSPH1Q8WYR4 309 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 ZNF862O60290 1169 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 ENO2P09104 434 aaPredicted RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 CCND1P24385 295 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 GPR15P49685 360 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 VAC14Q08AM6 782 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 RASA2Q15283 850 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms