RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 OR4Q2P0C623 313 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 PDE1BQ01064 536 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 CHI3L2Q15782 390 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 SLC39A12Q504Y0 691 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 RTN4RL1Q86UN2 441 aaPredicted RBP20.69■□□□□ 0.9
VSX1-202ENST00000376709 ZNF280BQ86YH2 543 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 SCN4BQ8IWT1 228 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 ATP2A3Q93084 1043 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 PGLYRP2Q96PD5 576 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 CFHR5Q9BXR6 569 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 RGS18Q9NS28 235 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 DFFAO00273 331 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 TOP3BO95985 862 aaKnown RBP20.68■□□□□ 0.9
VSX1-202ENST00000376709 JCHAINP01591 159 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 ITGA2BP08514 1039 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 COG7P83436 770 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 CCDC91Q7Z6B0 441 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 ACMSDQ8TDX5 336 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 PXYLP1Q8TE99 480 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 ZNF669Q96BR6 464 aaPredicted RBP20.68■□□□□ 0.9
VSX1-202ENST00000376709 TMEM237Q96Q45 408 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 TMEM120AQ9BXJ8 343 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 ARHGEF38Q9NXL2 777 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 SIRPGQ9P1W8 387 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 KANSL3Q9P2N6 904 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 SFMBT1Q9UHJ3 866 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 MYO16Q9Y6X6 1858 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 MSI1O43347 362 aaKnown RBP20.68■□□□□ 0.9
VSX1-202ENST00000376709 B4GALT3O60512 393 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 CCR1P32246 355 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 BST1Q10588 318 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 BRMS1LQ5PSV4 323 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 KCTD11Q693B1 232 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 SLC24A5Q71RS6 500 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 CLNKQ7Z7G1 428 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.68■□□□□ 0.9
VSX1-202ENST00000376709 LINC01599Q8WXQ3 324 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 TEKT5Q96M29 485 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 MLPHQ9BV36 600 aaPredicted RBP20.68■□□□□ 0.9
VSX1-202ENST00000376709 NOD2Q9HC29 1040 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 CASS4Q9NQ75 786 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 ABI2Q9NYB9 513 aaPredicted RBP20.68■□□□□ 0.9
VSX1-202ENST00000376709 HEY2Q9UBP5 337 aa20.68■□□□□ 0.9
VSX1-202ENST00000376709 MAGED2Q9UNF1 606 aaPredicted RBP20.68■□□□□ 0.9
VSX1-202ENST00000376709 MTO1Q9Y2Z2 717 aaKnown RBP20.68■□□□□ 0.9
VSX1-202ENST00000376709 INPPL1O15357 1258 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 DDHD2O94830 711 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 EOMESO95936 686 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 DLDP09622 509 aaKnown RBP20.67■□□□□ 0.9
VSX1-202ENST00000376709 PRPSAP1Q14558 356 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 SPDYAQ5MJ70 313 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 KYAT3Q6YP21 454 aaKnown RBP20.67■□□□□ 0.9
VSX1-202ENST00000376709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.67■□□□□ 0.9
VSX1-202ENST00000376709 URGCPQ8TCY9 931 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 FCRL3Q96P31 734 aaPredicted RBP20.67■□□□□ 0.9
VSX1-202ENST00000376709 RAB3IPQ96QF0 476 aaPredicted RBP20.67■□□□□ 0.9
VSX1-202ENST00000376709 HAPLN3Q96S86 360 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 APOL2Q9BQE5 337 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 LRMDAQ9H2I8 198 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 SMOC2Q9H3U7 446 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 UBP1Q9NZI7 540 aa20.67■□□□□ 0.9
VSX1-202ENST00000376709 TNFRSF10BO14763 440 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 ATP9BO43861 1147 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 PAGE1O75459 146 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 CBX6O95503 412 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 BPGMP07738 259 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 GP5P40197 560 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 RASSF2P50749 326 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 IRX4P78413 519 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 ZBTB16Q05516 673 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 EIF4EBP2Q13542 120 aaPredicted RBP20.66■□□□□ 0.9
VSX1-202ENST00000376709 CASP10Q92851 521 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 CPNE1Q99829 537 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 KCNK13Q9HB14 408 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 STARD7Q9NQZ5 370 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 TTC3P53804 2025 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 FRMPD3Q5JV73 1810 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 BIRC5O15392 142 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 GLRA3O75311 464 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 USP1O94782 785 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 OR1G1P47890 313 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 PGFP49763 221 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 RIPK1Q13546 671 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 PDE1CQ14123 709 aaPredicted RBP20.66■□□□□ 0.9
VSX1-202ENST00000376709 NOMO2Q5JPE7 1267 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 CLLU1OSQ5K130 101 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 TMEM135Q86UB9 458 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 ATPAF2Q8N5M1 289 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 RAB3IL1Q8TBN0 382 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 USP33Q8TEY7 942 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 C7orf26Q96N11 449 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 TSEN34Q9BSV6 310 aaKnown RBP20.66■□□□□ 0.9
VSX1-202ENST00000376709 NUDT5Q9UKK9 219 aa20.66■□□□□ 0.9
VSX1-202ENST00000376709 A8MUI8 341 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 CERCAMQ5T4B2 595 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 FCRL2Q96LA5 508 aaPredicted RBP20.65■□□□□ 0.9
VSX1-202ENST00000376709 CATSPERBQ9H7T0 1116 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 HMX1Q9NP08 348 aaPredicted RBP20.65■□□□□ 0.9
VSX1-202ENST00000376709 NEU3Q9UQ49 428 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 PRG3Q9Y2Y8 225 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms