RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 IL1BP01584 269 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 IGHV4-34P06331 123 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 CD38P28907 300 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 MTIF2P46199 727 aaKnown RBP15.21■□□□□ 0.03
HDAC6-204ENST00000376643 PSMD8P48556 350 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 UBE2HP62256 183 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 SCAPQ12770 1279 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 OVGP1Q12889 678 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 ZNF177Q13360 481 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-204ENST00000376643 FSCBQ5H9T9 825 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 CCAR2Q8N163 923 aaKnown RBP15.21■□□□□ 0.03
HDAC6-204ENST00000376643 MSANTD4Q8NCY6 345 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 C1orf131Q8NDD1 294 aaKnown RBP15.21■□□□□ 0.03
HDAC6-204ENST00000376643 OR8D1Q8WZ84 308 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 SHC3Q92529 594 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 RPRD1AQ96P16 312 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-204ENST00000376643 ELF4Q99607 663 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-204ENST00000376643 NEUROG2Q9H2A3 272 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 DACH1Q9UI36 760 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 STAP1Q9ULZ2 295 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 DMTF1Q9Y222 760 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 PCDHGA1Q9Y5H4 931 aa15.21■□□□□ 0.03
HDAC6-204ENST00000376643 A0A1B0GTQ1 180 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 TTC34A8MYJ7 566 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 H0Y8X5 98 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 CLDN11O75508 207 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 DKK1O94907 266 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 PDGFRAP16234 1089 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 MZF1P28698 734 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-204ENST00000376643 ADPRHP54922 357 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 KRT83P78385 493 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 EIF4EBP2Q13542 120 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-204ENST00000376643 ARHGAP44Q17R89 818 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 PRPF39Q86UA1 669 aaKnown RBP15.2■□□□□ 0.02
HDAC6-204ENST00000376643 DEFB106AQ8N104 65 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 PNPLA1Q8N8W4 532 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 OR14C36Q8NHC7 312 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 CRACR2AQ9BSW2 395 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 PDCL3Q9H2J4 239 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 DKK4Q9UBT3 224 aa15.2■□□□□ 0.02
HDAC6-204ENST00000376643 CHD6Q8TD26 2715 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 DAB1O75553 588 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 F9P00740 461 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 CALCAP01258 141 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 ITGAVP06756 1048 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 C1SP09871 688 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 NOS2P35228 1153 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 HNF1BP35680 557 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 BRMS1LQ5PSV4 323 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 OR6B2Q6IFH4 312 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 NAPEPLDQ6IQ20 393 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 MMS22LQ6ZRQ5 1243 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 SLC26A9Q7LBE3 791 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 SLCO6A1Q86UG4 719 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 IQCHQ86VS3 1027 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 STK40Q8N2I9 435 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 ZNF397Q8NF99 534 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-204ENST00000376643 PTPRN2Q92932 1015 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 SERAC1Q96JX3 654 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 SLC6A18Q96N87 628 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 CPXM1Q96SM3 734 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 FAM129BQ96TA1 746 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 PRMT1Q99873 361 aaKnown RBP15.19■□□□□ 0.02
HDAC6-204ENST00000376643 MTG2Q9H4K7 406 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 ERVMER34-1Q9H9K5 563 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 CYTH4Q9UIA0 394 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 XPO7Q9UIA9 1087 aaKnown RBP15.19■□□□□ 0.02
HDAC6-204ENST00000376643 SLCO3A1Q9UIG8 710 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 VPS28Q9UK41 221 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 LHX6Q9UPM6 363 aa15.19■□□□□ 0.02
HDAC6-204ENST00000376643 FRYQ5TBA9 3013 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 SYNJ2BP-COX16A0A087WUM0 186 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3DA0A087WVF3 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3IA0A087WXS9 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3EA0A087X179 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3KA0A087X1G2 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3FA6NER0 549 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-204ENST00000376643 BECN2A8MW95 431 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3LB9A6J9 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 ATP9BO43861 1147 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 ATXN1LP0C7T5 689 aaKnown RBP15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3HP0C7X1 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 ZNF18P17022 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 SCNN1AP37088 669 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 CTSOP43234 321 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-204ENST00000376643 CDH4P55283 916 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 SLC6A3Q01959 620 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 AUHQ13825 339 aaKnown RBP15.18■□□□□ 0.02
HDAC6-204ENST00000376643 MAN2A1Q16706 1144 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3GQ6DHY5 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3CQ6IPX1 549 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 FBXL22Q6P050 247 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 LRRC31Q6UY01 552 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TMPRSS12Q86WS5 348 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D3Q8IZP1 549 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-204ENST00000376643 APCDD1Q8J025 514 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 TMEM35BQ8NCS4 154 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 MYEOVQ96EZ4 313 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 RPL10LQ96L21 214 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms