RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ANKRD6Q9Y2G4 727 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 IPPQ9Y573 584 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 SMIM28A0A1B0GU29 152 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 F8W810 466 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 DCXO43602 365 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 SNX3O60493 162 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 CCNT2O60583 730 aaKnown RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 FKBP6O75344 327 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 ZNF23P17027 643 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 HOXB8P17481 243 aaPredicted RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 CCNG1P51959 295 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 BCL2L1Q07817 233 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 LRRC8BQ6P9F7 803 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 FAM35AQ86V20 835 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 GOLGA2P5Q9HBQ8 144 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 ERVK-5Q9HDB9 667 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 LNPEPQ9UIQ6 1025 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 LTN1O94822 1766 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 KANSL1LA0AUZ9 987 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 TPP1O14773 563 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 LCA5LO95447 670 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 KRT6AP02538 564 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 KRT6BP04259 564 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 MMP3P08254 477 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 SKIV2L2P42285 1042 aaKnown RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 BRCC3P46736 316 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 KRT6CP48668 564 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 HIRAP54198 1017 aaPredicted RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 PABPC1LQ4VXU2 614 aaKnown RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 TTC33Q6PID6 262 aaPredicted RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 MSL3Q8N5Y2 521 aaKnown RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 POLG2Q9UHN1 485 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 SALL4Q9UJQ4 1053 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 COL1A2P08123 1366 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 AMHP03971 560 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 HSPA13P48723 471 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 FLT3LGP49771 235 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 NAGLUP54802 743 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 ILF2Q12905 390 aaKnown RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 CYP51A1Q16850 503 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 LCLAT1Q6UWP7 414 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 RASGEF1CQ8N431 466 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 BTBD10Q9BSF8 475 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 YIPF2Q9BWQ6 316 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 ACSS3Q9H6R3 686 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 TUBGCP4Q9UGJ1 667 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 MGAT4DA6NG13 374 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 BUD23O43709 281 aaKnown RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 KATNA1O75449 491 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 PIGNO95427 931 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 IGSF6O95976 241 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 ERBB2P04626 1255 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 HECTD3Q5T447 861 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 ARMC12Q5T9G4 340 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 IQCKQ8N0W5 287 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 JADE3Q92613 823 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 NR1H4Q96RI1 486 aaPredicted RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 EBNA1BP2Q99848 306 aaKnown RBP13.87□□□□□ -0.19
C9orf47-203ENST00000375851 MYLK2Q9H1R3 596 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 PARVBQ9HBI1 364 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 PCDH18Q9HCL0 1135 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 XPNPEP1Q9NQW7 623 aa13.87□□□□□ -0.19
C9orf47-203ENST00000375851 ARIH2O95376 493 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 HPCAP84074 193 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 TRIM48Q8IWZ4 208 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 C1orf127Q8N9H9 656 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 METTL6Q8TCB7 284 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 DERAQ9Y315 318 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 GNG14A0A1W2PPG7 69 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 GPR25O00155 361 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 SCAMP3O14828 347 aaKnown RBP13.86□□□□□ -0.19
C9orf47-203ENST00000375851 ALOX15BO15296 676 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 RAD51BO15315 384 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 DDX3YO15523 660 aaKnown RBP13.86□□□□□ -0.19
C9orf47-203ENST00000375851 SLC2A4P14672 509 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 CD86P42081 329 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 ARMC6Q6NXE6 501 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 EXOC3L1Q86VI1 746 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 PLEKHA8Q96JA3 519 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 CNBD2Q96M20 576 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 DMAC2Q9NW81 257 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 ZNF214Q9UL59 606 aaPredicted RBP13.86□□□□□ -0.19
C9orf47-203ENST00000375851 FAM50BQ9Y247 325 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 SOWAHBA6NEL2 793 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 GLTPD2A6NH11 291 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 BTN3A1O00481 513 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 CILPO75339 1184 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 TSHRP16473 764 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 PAX3P23760 479 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 FLT3P36888 993 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 CCL23P55773 120 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 CDC16Q13042 620 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 BOP1Q14137 746 aaKnown RBP13.86□□□□□ -0.19
C9orf47-203ENST00000375851 SDHAF4Q5VUM1 108 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 DCLRE1AQ6PJP8 1040 aa13.86□□□□□ -0.19
C9orf47-203ENST00000375851 SLC44A2Q8IWA5 706 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms