RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KCNA4P22459 653 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 IQSEC1Q6DN90 963 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 TRMT10BQ6PF06 316 aaKnown RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 ANKRD36BP1Q96IX9 119 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 KCNK16Q96T55 309 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 STN1Q9H668 368 aaKnown RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 GJD2Q9UKL4 321 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 TREHO43280 583 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 DCXO43602 365 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 KRT38O76015 456 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 TNNC2P02585 160 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 THRAP10827 490 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 TBXAS1P24557 533 aaPredicted RBP13.22□□□□□ -0.29
MSH5-204ENST00000375755 HOXA11P31270 313 aaPredicted RBP13.22□□□□□ -0.29
MSH5-204ENST00000375755 ARRB2P32121 409 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 CAP1Q01518 475 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 GLRA4Q5JXX5 417 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 POTEHQ6S545 545 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 DPH6Q7L8W6 267 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 NIPA2Q8N8Q9 360 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 DNAJB3Q8WWF6 145 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 ZNF512Q96ME7 567 aaPredicted RBP13.22□□□□□ -0.29
MSH5-204ENST00000375755 NFKBIZQ9BYH8 718 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 CYTH4Q9UIA0 394 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 EMCNQ9ULC0 261 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 BARX2Q9UMQ3 279 aaPredicted RBP13.22□□□□□ -0.29
MSH5-204ENST00000375755 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 WDR37Q9Y2I8 494 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 SH3PXD2BA1X283 911 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 ZNF195O14628 629 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 MCF2LO15068 1137 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 ZBTB14O43829 449 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 LRCH4O75427 683 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 MYL3P08590 195 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 PDGFRBP09619 1106 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 PSMA2P25787 234 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
MSH5-204ENST00000375755 MSX2P35548 267 aaPredicted RBP13.22□□□□□ -0.29
MSH5-204ENST00000375755 ENTPD1P49961 510 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 CLCN2P51788 898 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 TAF5Q15542 800 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 TAZQ16635 292 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 FAXCQ5TGI0 409 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 C17orf99Q6UX52 265 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 PATL1Q86TB9 770 aaKnown RBP13.22□□□□□ -0.29
MSH5-204ENST00000375755 SPATA18Q8TC71 538 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 SORT1Q99523 831 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 ADAMTS10Q9H324 1103 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 PFDN4Q9NQP4 134 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 SNTG2Q9NY99 539 aa13.22□□□□□ -0.29
MSH5-204ENST00000375755 PIK3R2O00459 728 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 TPD52L2O43399 206 aaKnown RBP13.21□□□□□ -0.29
MSH5-204ENST00000375755 GPR32O75388 356 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
MSH5-204ENST00000375755 RFC1P35251 1148 aaPredicted RBP13.21□□□□□ -0.29
MSH5-204ENST00000375755 CRHR2Q13324 411 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 BTG3Q14201 252 aaPredicted RBP13.21□□□□□ -0.29
MSH5-204ENST00000375755 CYTH1Q15438 398 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 DENND1BQ6P3S1 775 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 DARS2Q6PI48 645 aaKnown RBP13.21□□□□□ -0.29
MSH5-204ENST00000375755 ARMCX6Q7L4S7 300 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 ZMAT2Q96NC0 199 aaKnown RBP13.21□□□□□ -0.29
MSH5-204ENST00000375755 RAB6BQ9NRW1 208 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 DNAJC28Q9NX36 388 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 PADI4Q9UM07 663 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 APOC4-APOC2K7ER74 178 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 APOC2P02655 101 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 CDK9P50750 372 aaKnown RBP13.21□□□□□ -0.29
MSH5-204ENST00000375755 ADRM1Q16186 407 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 FAM187BQ17R55 369 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 PPP1R2P3Q6NXS1 205 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 CAND1Q86VP6 1230 aaKnown RBP13.21□□□□□ -0.29
MSH5-204ENST00000375755 ADCY4Q8NFM4 1077 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 JOSD2Q8TAC2 188 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 GRIN3AQ8TCU5 1115 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 PKP2Q99959 881 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 STK39Q9UEW8 545 aa13.21□□□□□ -0.29
MSH5-204ENST00000375755 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.21□□□□□ -0.3
MSH5-204ENST00000375755 CHADO15335 359 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 APOEP02649 317 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 CPA3P15088 417 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 CD19P15391 556 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 AKAP5P24588 427 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 ACAT1P24752 427 aaKnown RBP13.21□□□□□ -0.3
MSH5-204ENST00000375755 CCR3P51677 355 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 ROR1Q01973 937 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 UNC5AQ6ZN44 842 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 TSPAN14Q8NG11 270 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 APBB2Q92870 758 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 CCT7Q99832 543 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 LPIN3Q9BQK8 851 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 PCSK1NQ9UHG2 260 aa13.21□□□□□ -0.3
MSH5-204ENST00000375755 KANSL1LA0AUZ9 987 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 TRDMT1O14717 391 aaKnown RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 HCRTO43612 131 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 MCF2P10911 925 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms