RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 TMEM51Q9NW97 253 aa16.43■□□□□ 0.22
C11orf88-202ENST00000375618 SLCO3A1Q9UIG8 710 aa16.43■□□□□ 0.22
C11orf88-202ENST00000375618 SMG5Q9UPR3 1016 aaKnown RBP16.43■□□□□ 0.22
C11orf88-202ENST00000375618 ERVW-1Q9UQF0 538 aa16.43■□□□□ 0.22
C11orf88-202ENST00000375618 SCINQ9Y6U3 715 aa16.43■□□□□ 0.22
C11orf88-202ENST00000375618 CKAP5Q14008 2032 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 A0A0D9SEW6 157 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 LRCH4O75427 683 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 RPP40O75818 363 aaKnown RBP16.42■□□□□ 0.22
C11orf88-202ENST00000375618 TPM1P09493 284 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 BCKDHBP21953 392 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 MIPP30301 263 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 COPAP53621 1224 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 SEMA3BQ13214 749 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 ARL13BQ3SXY8 428 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 RNF219Q5W0B1 726 aaPredicted RBP16.42■□□□□ 0.22
C11orf88-202ENST00000375618 KBTBD6Q86V97 674 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 CNGA4Q8IV77 575 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 FAM160A2Q8N612 972 aaPredicted RBP16.42■□□□□ 0.22
C11orf88-202ENST00000375618 RPL10LQ96L21 214 aaKnown RBP16.42■□□□□ 0.22
C11orf88-202ENST00000375618 MRGPRX1Q96LB2 322 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 NUP85Q9BW27 656 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 ZYG11BQ9C0D3 744 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 ZNHIT6Q9NWK9 470 aaKnown RBP16.42■□□□□ 0.22
C11orf88-202ENST00000375618 PPARGC1AQ9UBK2 798 aaKnown RBP16.42■□□□□ 0.22
C11orf88-202ENST00000375618 PCSK1NQ9UHG2 260 aa16.42■□□□□ 0.22
C11orf88-202ENST00000375618 MBD1Q9UIS9 605 aaPredicted RBP16.42■□□□□ 0.22
C11orf88-202ENST00000375618 DOCK4Q8N1I0 1966 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 TTC34A8MYJ7 566 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 NPC1O15118 1278 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 GFRA3O60609 400 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 SNAP91O60641 907 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 ALDH1A2O94788 518 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 LMNAP02545 664 aaKnown RBP16.41■□□□□ 0.22
C11orf88-202ENST00000375618 ASLP04424 464 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 ATP5BP06576 529 aaKnown RBP16.41■□□□□ 0.22
C11orf88-202ENST00000375618 EPHX1P07099 455 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 RHOCP08134 193 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 VAV1P15498 845 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 GLDCP23378 1020 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 IL1R2P27930 398 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 P2RY2P41231 377 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 ECT2LQ008S8 904 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 CAMK2GQ13555 558 aaPredicted RBP16.41■□□□□ 0.22
C11orf88-202ENST00000375618 SLC12A1Q13621 1099 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 SIM2Q14190 667 aaPredicted RBP16.41■□□□□ 0.22
C11orf88-202ENST00000375618 MAP7D1Q3KQU3 841 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 TXNRD3NBQ6F5E7 133 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 CCDC117Q8IWD4 279 aaPredicted RBP16.41■□□□□ 0.22
C11orf88-202ENST00000375618 OR7D4Q8NG98 312 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 SNRNP25Q9BV90 132 aaKnown RBP16.41■□□□□ 0.22
C11orf88-202ENST00000375618 SEMA4AQ9H3S1 761 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 MRPL47Q9HD33 250 aaKnown RBP16.41■□□□□ 0.22
C11orf88-202ENST00000375618 PRSS16Q9NQE7 514 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 BCCIPQ9P287 314 aaKnown RBP eCLIP16.41■□□□□ 0.22
C11orf88-202ENST00000375618 PLA2G4CQ9UP65 541 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 USP34Q70CQ2 3546 aa16.41■□□□□ 0.22
C11orf88-202ENST00000375618 GPR179Q6PRD1 2367 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 AKR1B10O60218 316 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 L1CAMP32004 1257 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 CNR2P34972 360 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 EFHC2Q5JST6 749 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 ACBD5Q5T8D3 534 aaPredicted RBP16.4■□□□□ 0.22
C11orf88-202ENST00000375618 RWDD4Q6NW29 188 aaKnown RBP16.4■□□□□ 0.22
C11orf88-202ENST00000375618 PRR23BQ6ZRT6 265 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 CACUL1Q86Y37 369 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 PGBD3Q8N328 593 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 TBC1D31Q96DN5 1066 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 KCTD15Q96SI1 283 aaPredicted RBP16.4■□□□□ 0.22
C11orf88-202ENST00000375618 DEF6Q9H4E7 631 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 ANAPC7Q9UJX3 599 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 VPS28Q9UK41 221 aa16.4■□□□□ 0.22
C11orf88-202ENST00000375618 K7ERQ8 282 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 SIN3BO75182 1162 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 MOCS3O95396 460 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 MT-CO1P00395 513 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
C11orf88-202ENST00000375618 RHOQP17081 205 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 OR1E1P30953 314 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
C11orf88-202ENST00000375618 ACVRL1P37023 503 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 TSR1Q2NL82 804 aaKnown RBP16.39■□□□□ 0.21
C11orf88-202ENST00000375618 PLK5Q496M5 336 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 KIAA1324Q6UXG2 1013 aaKnown RBP16.39■□□□□ 0.21
C11orf88-202ENST00000375618 CEP68Q76N32 757 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 SETD3Q86TU7 594 aaPredicted RBP16.39■□□□□ 0.21
C11orf88-202ENST00000375618 FRS2Q8WU20 508 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 CCDC42Q96M95 316 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 MUC3BQ9H195 1237 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 DUSP15Q9H1R2 295 aaPredicted RBP16.39■□□□□ 0.21
C11orf88-202ENST00000375618 NOL6Q9H6R4 1146 aaKnown RBP16.39■□□□□ 0.21
C11orf88-202ENST00000375618 OSGEPQ9NPF4 335 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 TMEM248Q9NWD8 314 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 DNAI1Q9UI46 699 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 VPS51Q9UID3 782 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 AP4E1Q9UPM8 1137 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 ACTL7AQ9Y615 435 aa16.39■□□□□ 0.21
C11orf88-202ENST00000375618 ILVBLA1L0T0 632 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 CREB3O43889 395 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms