RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RHOBTB2Q9BYZ6 727 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 CHORDC1Q9UHD1 332 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 NBNO60934 754 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 PCNAP12004 261 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 ATP6V0D1P61421 351 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF513Q8N8E2 541 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 QRFPRQ96P65 431 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SARS2Q9NP81 518 aaKnown RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 RAD18Q9NS91 495 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 KLHL11Q9NVR0 708 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 DNPEPQ9ULA0 475 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 CCNE2O96020 404 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 EGFRP00533 1210 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 PRKG2Q13237 762 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 KIZQ2M2Z5 673 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 MOSPD2Q8NHP6 518 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 ATXN7L3BQ96GX2 97 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 TMEM176AQ96HP8 235 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 CLPBQ9H078 707 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 ELOVL6Q9H5J4 265 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 KBTBD13C9JR72 458 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 WWP2O00308 870 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 MTA2O94776 668 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 HLFQ16534 295 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SPRTNQ9H040 489 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 S100A14Q9HCY8 104 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 A0A0A0MRY4 1105 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 CABYRO75952 493 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 CRHR1P34998 444 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 RBM44Q6ZP01 1051 aaKnown RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SZRD1Q7Z422 152 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 LRRC17Q8N6Y2 441 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SPATA13Q96N96 652 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SMURF2Q9HAU4 748 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 NUDT5Q9UKK9 219 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 TMX2Q9Y320 296 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SIGLEC16A6NMB1 481 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 FAM196BA6NMK8 535 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 RPS12P25398 132 aaKnown RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 ANKS6Q68DC2 871 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 LIN54Q6MZP7 749 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 WDR59Q6PJI9 974 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 MPZL3Q6UWV2 235 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 MAP4K3Q8IVH8 894 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 GIPC3Q8TF64 312 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 BHMTQ93088 406 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SNX9Q9Y5X1 595 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 AXLP30530 894 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 FAUP35544 74 aaKnown RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 GLRA4Q5JXX5 417 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 UNC5BQ8IZJ1 945 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 PIK3R5Q8WYR1 880 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 NOL11Q9H8H0 719 aaKnown RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 FAM49BQ9NUQ9 324 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 GPRC5DQ9NZD1 345 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SEC14L4Q9UDX3 406 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 PADI4Q9UM07 663 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 MEGF6O75095 1541 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 RARAP10276 462 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 SKP1P63208 163 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 HERC3Q15034 1050 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 FBXO39Q8N4B4 442 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF276Q8N554 614 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 CD101Q93033 1021 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 REXO4Q9GZR2 422 aaKnown RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 RPRD1BQ9NQG5 326 aaKnown RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 GPC6Q9Y625 555 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 STON1Q9Y6Q2 735 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 DCXO43602 365 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 PTPN11Q06124 597 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-204ENST00000375290 DLG1Q12959 904 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 KRT78Q8N1N4 520 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 EMC1Q8N766 993 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 KCTD10Q9H3F6 313 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 IRAK3Q9Y616 596 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 MST1RQ04912 1400 aa10.37□□□□□ -0.75
PTCH1-204ENST00000375290 H0YJX3 145 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 KLF11O14901 512 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 SLC22A1O15245 554 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ITGALP20701 1170 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 CLCN5P51795 746 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 DENND5AQ6IQ26 1287 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 GALNT18Q6P9A2 607 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 BBS12Q6ZW61 710 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ERI1Q8IV48 349 aaKnown RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 NAT14Q8WUY8 206 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 PPP3R2Q96LZ3 170 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ARHGAP28Q9P2N2 729 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 TSPOAP1O95153 1857 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 M0QX08 132 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 INPP4BO15327 924 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 NDUFB10O96000 172 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ERICH5Q6P6B1 374 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 TAS2R1Q9NYW7 299 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 MGAT4DA6NG13 374 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 AP3S2P59780 193 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 DPYSL3Q14195 570 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 THEMIS2Q5TEJ8 643 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 FAM13CQ8NE31 585 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms