RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 RNF103O00237 685 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 WNT7AO00755 349 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 BMP10O95393 424 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 CSTAP01040 98 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 ARSEP51690 589 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 AANATQ16613 207 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 SMU1Q2TAY7 513 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 C10orf120Q5SQS8 335 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 CYB5R4Q7L1T6 521 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 DTX3Q8N9I9 347 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 KBTBD3Q8NAB2 608 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 C7orf43Q8WVR3 580 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 CINPQ9BW66 212 aaPredicted RBP9.26□□□□□ -0.93
UBR4-201ENST00000375218 JMJD4Q9H9V9 463 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 SPATA2Q9UM82 520 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 BAZ2BQ9UIF8 2168 aaKnown RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 CDC123O75794 336 aaPredicted RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 PGLSO95336 258 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 GCNT3O95395 438 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 ALDH2P05091 517 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 LACTBP83111 547 aaPredicted RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 CHRNDQ07001 517 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 RNF220Q5VTB9 566 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 PET117Q6UWS5 81 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 KIAA0319LQ8IZA0 1049 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 RMDN1Q96DB5 314 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 CRNKL1Q9BZJ0 848 aaKnown RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 VPS18Q9P253 973 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 STX18Q9P2W9 335 aaKnown RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 DCLK1O15075 740 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 GADD45BO75293 160 aaPredicted RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 CCNDBP1O95273 360 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 CKMT2P17540 419 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 TCN1P20061 433 aaPredicted RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 SLC26A2P50443 739 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 LGALS3BPQ08380 585 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 TDRD12Q587J7 1177 aaKnown RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 NFRKBQ6P4R8 1299 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 USP37Q86T82 979 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 MOGAT3Q86VF5 341 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 CADM3Q8N126 398 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 OR8K1Q8NGG5 319 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 CCDC42Q96M95 316 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 CGREF1Q99674 301 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 ITPAQ9BY32 194 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 KLC4Q9NSK0 619 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 MAP10Q9P2G4 905 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 PCDHGA11Q9Y5H2 935 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 RBM8AQ9Y5S9 174 aaKnown RBP9.25□□□□□ -0.93
UBR4-201ENST00000375218 USH1CQ9Y6N9 552 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 RFX7Q2KHR2 1363 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 WDR90Q96KV7 1748 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 EDIL3O43854 480 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 MLYCDO95822 493 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 F13A1P00488 732 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 HMGCRP04035 888 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 TFPTP0C1Z6 253 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 CYP2A7P20853 494 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 GP5P40197 560 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 STK4Q13043 487 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 DUSP4Q13115 394 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 ANGPT1Q15389 498 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 DHCR24Q15392 516 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 MAPK6Q16659 721 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 KANK2Q63ZY3 851 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 DPY19L2Q6NUT2 758 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 PMF1Q6P1K2 205 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 ZNF227Q86WZ6 799 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 HAUS8Q9BT25 410 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 GDAP2Q9NXN4 497 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 POLLQ9UGP5 575 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 ATP6V1HQ9UI12 483 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 PMF1-BGLAPU3KQ54 211 aa9.25□□□□□ -0.93
UBR4-201ENST00000375218 B4E1Z4 1266 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CLDN3O15551 220 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 LCA5LO95447 670 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CFBP00751 764 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 GYG1P46976 350 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 STARP49675 285 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 RGS19P49795 217 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 RNFT1Q5M7Z0 435 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 DEPDC1Q5TB30 811 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 TBC1D19Q8N5T2 526 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 XXYLT1Q8NBI6 393 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 SLC26A7Q8TE54 656 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 KCNE4Q8WWG9 221 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 TSC22D3Q99576 134 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 ARMT1Q9H993 441 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 THG1LQ9NWX6 298 aaKnown RBP9.24□□□□□ -0.93
UBR4-201ENST00000375218 DDX43Q9NXZ2 648 aaKnown RBP9.24□□□□□ -0.93
UBR4-201ENST00000375218 UBA2Q9UBT2 640 aaPredicted RBP9.24□□□□□ -0.93
UBR4-201ENST00000375218 SLC13A4Q9UKG4 626 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CLCA2Q9UQC9 943 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 OTOFQ9HC10 1997 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 WDR81Q562E7 1941 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 H0YJX3 145 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CPNE3O75131 537 aaKnown RBP9.24□□□□□ -0.93
UBR4-201ENST00000375218 PHACTR2O75167 634 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 FKBP9O95302 570 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms