RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 BAIAP3O94812 1187 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 IGLV3-27P01718 113 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 CRADDP78560 199 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 PLD1Q13393 1074 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 OLIG2Q13516 323 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 RASA2Q15283 850 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 TEX44Q53QW1 395 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 TPGS2Q68CL5 300 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 CASC4Q6P4E1 433 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 ZNF683Q8IZ20 524 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 PDZD8Q8NEN9 1154 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 DCAKDQ8WVC6 231 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 CEP295NLQ96MC4 621 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 ZYG11BQ9C0D3 744 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 NACA2Q9H009 215 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 TRABDQ9H4I3 376 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 KIF9Q9HAQ2 790 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 PLAC1Q9HBJ0 212 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 ACTL7BQ9Y614 415 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 ABLIM3O94929 683 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 CCNCP24863 283 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 MGAT1P26572 445 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 ZNF33AQ06730 810 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 TAF12Q16514 161 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 ADGRD1Q6QNK2 874 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 DDX53Q86TM3 631 aaKnown RBP17.29■□□□□ 0.36
PTPN20-203ENST00000374342 PRPF39Q86UA1 669 aaKnown RBP17.29■□□□□ 0.36
PTPN20-203ENST00000374342 NLRP14Q86W24 1093 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 CHSY1Q86X52 802 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 DPF3Q92784 378 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 CENPTQ96BT3 561 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 TEKT5Q96M29 485 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 CDK5RAP1Q96SZ6 601 aaKnown RBP17.29■□□□□ 0.36
PTPN20-203ENST00000374342 FAM107BQ9H098 131 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 IL23AQ9NPF7 189 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 IKBKGQ9Y6K9 419 aa17.29■□□□□ 0.36
PTPN20-203ENST00000374342 WASH4PA8MWX3 477 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 AP2A1O95782 977 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 CSH1P0DML2 217 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 CSH2P0DML3 217 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 CA8P35219 290 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 ALDH1A3P47895 512 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 IFNAR2P48551 515 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 RING1Q06587 406 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 AFMIDQ63HM1 303 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 CTAGE3PQ8IX95 158 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.28■□□□□ 0.36
PTPN20-203ENST00000374342 GSDMBQ8TAX9 411 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 OVCA2Q8WZ82 227 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 TSGA13Q96PP4 275 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 MLPHQ9BV36 600 aaPredicted RBP17.28■□□□□ 0.36
PTPN20-203ENST00000374342 MLXIPLQ9NP71 852 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 DNMT3LQ9UJW3 386 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 PCDHA11Q9Y5I1 949 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 MYLKQ15746 1914 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 MIA3Q5JRA6 1907 aa17.28■□□□□ 0.36
PTPN20-203ENST00000374342 SRRM3A6NNA2 597 aaPredicted RBP17.27■□□□□ 0.36
PTPN20-203ENST00000374342 NDUFAB1O14561 156 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 PRRG1O14668 218 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 MAFKO60675 156 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 USP12O75317 370 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 CNTN5O94779 1100 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 INHBAP08476 426 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 GSTA2P09210 222 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 CCNB1P14635 433 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 RHOQP17081 205 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 HMGA1P17096 107 aaKnown RBP17.27■□□□□ 0.36
PTPN20-203ENST00000374342 PAPOLAP51003 745 aaKnown RBP17.27■□□□□ 0.36
PTPN20-203ENST00000374342 KCNQ1P51787 676 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 VEPH1Q14D04 833 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 LRRC14Q15048 493 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 ALFQ53S48 1182 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 NUGGCQ68CJ6 796 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 FBXL22Q6P050 247 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 FOXR1Q6PIV2 292 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 CIR1Q86X95 450 aaPredicted RBP17.27■□□□□ 0.36
PTPN20-203ENST00000374342 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 DNAJC5GQ8N7S2 189 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 DYDC1Q8WWB3 177 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 IGSF8Q969P0 613 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 PRMT1Q99873 361 aaKnown RBP17.27■□□□□ 0.36
PTPN20-203ENST00000374342 SYBUQ9NX95 663 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 SENP1Q9P0U3 644 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 HSFX1Q9UBD0 423 aa17.27■□□□□ 0.36
PTPN20-203ENST00000374342 PPARGC1AQ9UBK2 798 aaKnown RBP17.27■□□□□ 0.36
PTPN20-203ENST00000374342 HBS1LQ9Y450 684 aaKnown RBP17.27■□□□□ 0.36
PTPN20-203ENST00000374342 SDR42E2A6NKP2 422 aa17.27■□□□□ 0.35
PTPN20-203ENST00000374342 SPAG7O75391 227 aa17.27■□□□□ 0.35
PTPN20-203ENST00000374342 GJB5O95377 273 aa17.27■□□□□ 0.35
PTPN20-203ENST00000374342 PPM1AP35813 382 aa17.27■□□□□ 0.35
PTPN20-203ENST00000374342 ATP5C1P36542 298 aaKnown RBP17.27■□□□□ 0.35
PTPN20-203ENST00000374342 KPNA1P52294 538 aaPredicted RBP17.27■□□□□ 0.35
PTPN20-203ENST00000374342 PRPSAP1Q14558 356 aa17.27■□□□□ 0.35
PTPN20-203ENST00000374342 TIGD7Q6NT04 549 aaPredicted RBP17.27■□□□□ 0.35
PTPN20-203ENST00000374342 PPM1NQ8N819 430 aa17.27■□□□□ 0.35
PTPN20-203ENST00000374342 OR52K1Q8NGK4 314 aa17.27■□□□□ 0.35
PTPN20-203ENST00000374342 ZSCAN18Q8TBC5 510 aaPredicted RBP17.27■□□□□ 0.35
PTPN20-203ENST00000374342 SLC44A1Q8WWI5 657 aa17.27■□□□□ 0.35
PTPN20-203ENST00000374342 RPRD1AQ96P16 312 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms