RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PRKAG3Q9UGI9 489 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 NDOR1Q9UHB4 597 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 COQ6Q9Y2Z9 468 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 KANSL1LA0AUZ9 987 aa14.58□□□□□ -0.07
TRAF1-201ENST00000373887 PAICSP22234 425 aaKnown RBP14.58□□□□□ -0.07
TRAF1-201ENST00000373887 CCT3P49368 545 aaKnown RBP14.58□□□□□ -0.07
TRAF1-201ENST00000373887 MRPS6P82932 125 aaKnown RBP14.58□□□□□ -0.07
TRAF1-201ENST00000373887 POU6F1Q14863 301 aa14.58□□□□□ -0.07
TRAF1-201ENST00000373887 NAIF1Q69YI7 327 aaPredicted RBP14.58□□□□□ -0.07
TRAF1-201ENST00000373887 EID3Q8N140 333 aa14.58□□□□□ -0.07
TRAF1-201ENST00000373887 NFASCO94856 1347 aa14.58□□□□□ -0.07
TRAF1-201ENST00000373887 MYL12BO14950 172 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 TSPAN19P0C672 248 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 FOSL2P15408 326 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 PPP2R1BP30154 601 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 AMPD2Q01433 879 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 TSNQ15631 228 aaKnown RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 FAM98BQ52LJ0 330 aaKnown RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 DNAJC14Q6Y2X3 702 aaPredicted RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 DPY30Q9C005 99 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 SEMA6AQ9H2E6 1030 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 WDR41Q9HAD4 459 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 KIAA1257Q9ULG3 409 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 TBC1D3BA6NDS4 549 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 UBDO15205 165 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 INPP4BO15327 924 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 PHGDHO43175 533 aaKnown RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 RPLP2P05387 115 aaKnown RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 INHBEP58166 350 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 RBBP4Q09028 425 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 MAPK7Q13164 816 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 NTRK3Q16288 839 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 ZNF697Q5TEC3 545 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 PROSER1Q86XN7 944 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 USP7Q93009 1102 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 LRRC40Q9H9A6 602 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 SPG21Q9NZD8 308 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 F8VZ95 297 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 KPNA3O00505 521 aaPredicted RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 KRT6BP04259 564 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 CPA3P15088 417 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 KRT6CP48668 564 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 CACNA2D1P54289 1103 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 WSCD1Q658N2 575 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 ZNF410Q86VK4 478 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 CLVS1Q8IUQ0 354 aaPredicted RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 GRIN3AQ8TCU5 1115 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 FBXO44Q9H4M3 255 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 ZDHHC6Q9H6R6 413 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 RBM22Q9NW64 420 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 KLHL28Q9NXS3 571 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 VANGL2Q9ULK5 521 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 SLIT1O75093 1534 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.58□□□□□ -0.08
TRAF1-201ENST00000373887 OR6A2O95222 327 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 VAV1P15498 845 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 FASP25445 335 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 CCR4P51679 360 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 CES5AQ6NT32 575 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 MYCBPAPQ8TBZ2 947 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 TRIM39Q9HCM9 518 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 ZMYM5Q9UJ78 669 aa14.58□□□□□ -0.08
TRAF1-201ENST00000373887 RAD23AP54725 363 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 RNF44Q7L0R7 432 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 NT5DC4Q86YG4 428 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 KIAA0895Q8NCT3 520 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 TMC2Q8TDI7 906 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ERGIC2Q96RQ1 377 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 SLITRK2Q9H156 845 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 KBTBD4Q9NVX7 518 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ARIH1Q9Y4X5 557 aaPredicted RBP14.57□□□□□ -0.08
TRAF1-201ENST00000373887 TBC1D12O60347 775 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 TNFRSF21O75509 655 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 MYL12AP19105 171 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 FGFR3P22607 806 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 HOXA10P31260 410 aaPredicted RBP14.57□□□□□ -0.08
TRAF1-201ENST00000373887 TRAF3Q13114 568 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 RNF148Q8N7C7 305 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ZNF671Q8TAW3 534 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ZNF558Q96NG5 402 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 MIR1-1HGQ9H1L0 117 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 LIMD1Q9UGP4 676 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ACKR2O00590 384 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 MED26O95402 600 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 S100A13Q99584 98 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 APBA2Q99767 749 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 VAV3Q9UKW4 847 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 OR6B1O95007 311 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 CRTAMO95727 393 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 PUDPQ08623 228 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ERMARDQ5T6L9 678 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 CYP2R1Q6VVX0 501 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 SPOCD1Q6ZMY3 1216 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ILDR2Q71H61 639 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ZNF571Q7Z3V5 609 aaPredicted RBP14.57□□□□□ -0.08
TRAF1-201ENST00000373887 COLGALT1Q8NBJ5 622 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 SENP8Q96LD8 212 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 PNMA5Q96PV4 448 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms