RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 WFDC5Q8TCV5 224 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 CALR3Q96L12 384 aaKnown RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 PEBP4Q96S96 227 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 EPC1Q9H2F5 836 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 ZWILCHQ9H900 591 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 POLR3BQ9NW08 1133 aaPredicted RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 MPP6Q9NZW5 540 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 EBF1Q9UH73 591 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 REXO2Q9Y3B8 237 aaKnown RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 EML5Q05BV3 1969 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 ANTXRLA6NF34 631 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 PRRT4C9JH25 899 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 TIMM44O43615 452 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 CNTN5O94779 1100 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 OR1E1P30953 314 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 HTR7P34969 479 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 IRAK1P51617 712 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 ZNF135P52742 658 aaPredicted RBP18.86■□□□□ 0.61
PBX3-205ENST00000373492 LMAN2Q12907 356 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 MANEALQ5VSG8 457 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 HEATR6Q6AI08 1181 aaKnown RBP18.86■□□□□ 0.61
PBX3-205ENST00000373492 ASCL5Q7RTU5 278 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 TSTD1Q8NFU3 115 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 TEKT4Q8WW24 435 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 HHIPQ96QV1 700 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 DESI2Q9BSY9 194 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 MAGEB5Q9BZ81 275 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 CIPCQ9C0C6 399 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 CATSPERBQ9H7T0 1116 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 GPATCH2LQ9NWQ4 482 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 TFR2Q9UP52 801 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 USP34Q70CQ2 3546 aa18.86■□□□□ 0.61
PBX3-205ENST00000373492 BTNL10A8MVZ5 291 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 FAM72CH0Y354 149 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 SGK1O00141 431 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 NPC1O15118 1278 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 PJA2O43164 708 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 ADAM23O75077 832 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 RHOCP08134 193 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 HNRNPLP14866 589 aaKnown RBP eCLIP18.85■□□□□ 0.614e-7■■■■□ 21.4
PBX3-205ENST00000373492 POLR2EP19388 210 aaKnown RBP18.85■□□□□ 0.61
PBX3-205ENST00000373492 EPHB2P29323 1055 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 CD70P32970 193 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 NAP1L1P55209 391 aaKnown RBP18.85■□□□□ 0.61
PBX3-205ENST00000373492 TPI1P60174 286 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 KIF5AQ12840 1032 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 SMTNL2Q2TAL5 461 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 ALFQ53S48 1182 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 PPP6R3Q5H9R7 873 aaPredicted RBP18.85■□□□□ 0.61
PBX3-205ENST00000373492 FSCBQ5H9T9 825 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 C6orf118Q5T5N4 469 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 FAM72AQ5TYM5 149 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 FAM72DQ6L9T8 149 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 TFAP2DQ7Z6R9 452 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 KIAA0907Q7Z7F0 614 aaPredicted RBP18.85■□□□□ 0.61
PBX3-205ENST00000373492 SETD3Q86TU7 594 aaPredicted RBP18.85■□□□□ 0.61
PBX3-205ENST00000373492 FAM72BQ86X60 149 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 SUMF1Q8NBK3 374 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 HSPH1Q92598 858 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 ELOVL2Q9NXB9 296 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 HCN2Q9UL51 889 aa18.85■□□□□ 0.61
PBX3-205ENST00000373492 EEF2KO00418 725 aaKnown RBP18.84■□□□□ 0.61
PBX3-205ENST00000373492 AXIN1O15169 862 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 FGF10O15520 208 aaPredicted RBP18.84■□□□□ 0.61
PBX3-205ENST00000373492 HRO43593 1189 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 ALDH1A2O94788 518 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 ATP5BP06576 529 aaKnown RBP18.84■□□□□ 0.61
PBX3-205ENST00000373492 KRT7P08729 469 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 RARAP10276 462 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 TCF4P15884 667 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 RHOQP17081 205 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 IL1R2P27930 398 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 NTSR1P30989 418 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 HOXC13P31276 330 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 ARL4AP40617 200 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 SLC1A1P43005 524 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 MAPKAPK2P49137 400 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 SLC25A11Q02978 314 aaKnown RBP18.84■□□□□ 0.61
PBX3-205ENST00000373492 SEMA3BQ13214 749 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 IFI16Q16666 785 aaKnown RBP18.84■□□□□ 0.61
PBX3-205ENST00000373492 KCNT1Q5JUK3 1230 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 ZFYVE27Q5T4F4 411 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 EGFLAMQ63HQ2 1017 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 MBLAC2Q68D91 279 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 SDE2Q6IQ49 451 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 CYP4V2Q6ZWL3 525 aaPredicted RBP18.84■□□□□ 0.61
PBX3-205ENST00000373492 MUC3BQ9H195 1237 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 POLMQ9NP87 494 aaPredicted RBP18.84■□□□□ 0.61
PBX3-205ENST00000373492 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.84■□□□□ 0.61
PBX3-205ENST00000373492 DONSONQ9NYP3 566 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 TBC1D30Q9Y2I9 924 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 CEP192Q8TEP8 1941 aa18.84■□□□□ 0.61
PBX3-205ENST00000373492 RIF1Q5UIP0 2472 aaKnown RBP18.83■□□□□ 0.61
PBX3-205ENST00000373492 RCCD1A6NED2 376 aa18.83■□□□□ 0.6
PBX3-205ENST00000373492 DAPK3O43293 454 aa18.83■□□□□ 0.6
PBX3-205ENST00000373492 GJC1P36383 396 aa18.83■□□□□ 0.6
PBX3-205ENST00000373492 CSKP41240 450 aa18.83■□□□□ 0.6
PBX3-205ENST00000373492 PXNP49023 591 aaPredicted RBP18.83■□□□□ 0.6
PBX3-205ENST00000373492 CCZ1BP86790 482 aa18.83■□□□□ 0.6
PBX3-205ENST00000373492 CCZ1P86791 482 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms