RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 DCLK2Q8N568 766 aa12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 STMN2Q93045 179 aa12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 ZNF669Q96BR6 464 aaPredicted RBP12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 LENG1Q96BZ8 264 aaPredicted RBP12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 MLPHQ9BV36 600 aaPredicted RBP12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 RRN3Q9NYV6 651 aa12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 IL1RAPL1Q9NZN1 696 aa12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 TXNDC16Q9P2K2 825 aa12.85□□□□□ -0.35
TSPAN6-201ENST00000373020 HHLA1C9JL84 531 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 MTSS1O43312 755 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 MX2P20592 715 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 TYK2P29597 1187 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 SPRP35270 261 aaPredicted RBP12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 CSRP3P50461 194 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 CDK7P50613 346 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 ACTR3P61158 418 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 MUM1Q2TAK8 710 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 MYLK4Q86YV6 388 aaPredicted RBP12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 TMEM86AQ8N2M4 240 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 SENP8Q96LD8 212 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 ZFP42Q96MM3 310 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 PGLYRP2Q96PD5 576 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 PANX3Q96QZ0 392 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 SYT15Q9BQS2 421 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 FAM167BQ9BTA0 163 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 DDX43Q9NXZ2 648 aaKnown RBP12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 SLC7A8Q9UHI5 535 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 TRHDEQ9UKU6 1024 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 SOX13Q9UN79 622 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 KLHL2O95198 593 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 RALBP11234 206 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 IDH3AP50213 366 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 CSE1LP55060 971 aaKnown RBP12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 SESN3P58005 492 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 ABCE1P61221 599 aaKnown RBP12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 ZBTB17Q13105 803 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 ANKRD20A4Q4UJ75 823 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 TRIM68Q6AZZ1 485 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 RIPOR1Q6ZS17 1223 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 CMC1Q7Z7K0 106 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 LMNTD2Q8IXW0 634 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 GSTCDQ8NEC7 633 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 OSBPL1AQ9BXW6 950 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 TSPYL2Q9H2G4 693 aaPredicted RBP12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 BFARQ9NZS9 450 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 DNAJB4Q9UDY4 337 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 LRCH1Q9Y2L9 728 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 PCDHB12Q9Y5F1 795 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 PTCH2Q9Y6C5 1203 aa12.84□□□□□ -0.35
TSPAN6-201ENST00000373020 ZBTB24O43167 697 aaPredicted RBP12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 SIN3BO75182 1162 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 USP12O75317 370 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 CIB2O75838 187 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 AP1G2O75843 785 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 LTFP02788 710 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 LHX1P48742 406 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 CPT1AP50416 773 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 CACNA2D1P54289 1103 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 MRPS35P82673 323 aaKnown RBP12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 ADAM32Q8TC27 787 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 PPP4R1Q8TF05 950 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 PCED1BQ96HM7 432 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 VAT1Q99536 393 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 PTPN18Q99952 460 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 SLC38A7Q9NVC3 462 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 PNPOQ9NVS9 261 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 ZNF358Q9NW07 568 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 FLRT1Q9NZU1 646 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 APOBEC2Q9Y235 224 aaKnown RBP12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 WASF2Q9Y6W5 498 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 DOCK3Q8IZD9 2030 aa12.83□□□□□ -0.36
TSPAN6-201ENST00000373020 A0A088AWK7 358 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 C17orf102A2RUQ5 167 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 MPOP05164 745 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 CPA3P15088 417 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 GMPRP36959 345 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 CXCR3P49682 368 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 BTKQ06187 659 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 ITPRIPL1Q6GPH6 555 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 FSTL4Q6MZW2 842 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 STRA8Q7Z7C7 330 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 PLD6Q8N2A8 252 aaKnown RBP12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 SCG3Q8WXD2 468 aaKnown RBP12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 CLPTM1LQ96KA5 538 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 AGAP3Q96P47 875 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 COLEC11Q9BWP8 271 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 DDIT4Q9NX09 232 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 ANGPTL2Q9UKU9 493 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 SUFUQ9UMX1 484 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 TRPM7Q96QT4 1865 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 PATJQ8NI35 1801 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 MYBPHLA2RUH7 354 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms