RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 GCNT1Q02742 428 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 FRG1Q14331 258 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 PGM5Q15124 567 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 FAM187BQ17R55 369 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 CBWD6Q4V339 395 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 ARMC12Q5T9G4 340 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 PEG10Q86TG7 708 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 STK32CQ86UX6 486 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 FLCNQ8NFG4 579 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 TCP10LQ8TDR4 215 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 SETD4Q9NVD3 440 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 POMCP01189 267 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 SPIDRQ14159 915 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 MZT2AQ6P582 158 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 ZNF606Q8WXB4 792 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 LENG9Q96B70 501 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 PPP1R16AQ96I34 528 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 PRMT6Q96LA8 375 aaPredicted RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 ZNF112Q9UJU3 913 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 HPSEQ9Y251 543 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 LTFP02788 710 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 SLC6A3Q01959 620 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 TIMM50Q3ZCQ8 353 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 UBE2E3Q969T4 207 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 HGH1Q9BTY7 390 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 KIFC1Q9BW19 673 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 GBA2Q9HCG7 927 aaPredicted RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 ZMYM5Q9UJ78 669 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 SPTLC1O15269 473 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 VAPBO95292 243 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 INSRRP14616 1297 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 FNDC3BQ53EP0 1204 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 SETMARQ53H47 684 aaPredicted RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 KYAT3Q6YP21 454 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 USP45Q70EL2 814 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 EXOC3L1Q86VI1 746 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 ULK2Q8IYT8 1036 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 DHRSXQ8N5I4 330 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 CSGALNACT1Q8TDX6 532 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 FAM126AQ9BYI3 521 aaPredicted RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 NRDE2Q9H7Z3 1164 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 EVA1BQ9NVM1 165 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 ZNF624Q9P2J8 865 aaPredicted RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 COX7A2P14406 83 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ACSM2AQ08AH3 577 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 EPS8Q12929 822 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 TOP3AQ13472 1001 aaPredicted RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 CRY1Q16526 586 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 FAM171A1Q5VUB5 890 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ACSM2BQ68CK6 577 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 SLC25A24Q6NUK1 477 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 DENND6AQ8IWF6 608 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 IZUMO1Q8IYV9 350 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 TATDN2Q93075 761 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 MBD2Q9UBB5 411 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 UNC13AQ9UPW8 1703 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 C1orf232A0A0U1RR37 186 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 WWP2O00308 870 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 KCNH1O95259 989 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 FGRP09769 529 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 NUMBP49757 651 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 COPZ1P61923 177 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 BIKQ13323 160 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ITPK1Q13572 414 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 TCHHL1Q5QJ38 904 aaPredicted RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 INTS11Q5TA45 600 aaKnown RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 KIAA0408Q6ZU52 694 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ZDHHC13Q8IUH4 622 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 DNAJC1Q96KC8 554 aaKnown RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 ATAD3AQ9NVI7 634 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ARHGAP20Q9P2F6 1191 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 L1RE1Q9UN81 338 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 INVSQ9Y283 1065 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 TAF6LQ9Y6J9 622 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 CHURC1-FNTBB4DL54 471 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 AMPD1P23109 780 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 GSTM5P46439 218 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 IL2P60568 153 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 NAA20P61599 178 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 PTSQ03393 145 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 XRCC4Q13426 336 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 NDUFAF6Q330K2 333 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 INO80DQ53TQ3 878 aaPredicted RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 PPM1LQ5SGD2 360 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ZNF621Q6ZSS3 439 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 GPSM1Q86YR5 675 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 RACGAP1Q9H0H5 632 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 SEMA4AQ9H3S1 761 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 PIGUQ9H490 435 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 REEP1Q9H902 201 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 CDHR5Q9HBB8 845 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 COQ6Q9Y2Z9 468 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 BIRC5O15392 142 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 OR6B1O95007 311 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 POLR2EP19388 210 aaKnown RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 SERPINA4P29622 427 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 FMO4P31512 558 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms