RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 FGFR2P21802 821 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 GARTP22102 1010 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 SREBF1P36956 1147 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 STAT5BP51692 787 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 SOX10P56693 466 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 TAS2R40P59535 323 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 SNX17Q15036 470 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 DDR2Q16832 855 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 MOXD1Q6UVY6 613 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 C10orf82Q8WW14 230 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 NPAS2Q99743 824 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 MMTAG2Q9BU76 263 aaKnown RBP12.93□□□□□ -0.34
GPC4-201ENST00000370828 SNX8Q9Y5X2 465 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
GPC4-201ENST00000370828 ASTN1O14525 1302 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 FRMPD4Q14CM0 1322 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 TTLL13PA6NNM8 815 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 USP12O75317 370 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 ITGB3P05106 788 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 PGK2P07205 417 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 ZDHHC24Q6UX98 284 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 C10orf107Q8IVU9 208 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 ITFG1Q8TB96 612 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 FGFBP2Q9BYJ0 223 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 GGA3Q9NZ52 723 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 COG5Q9UP83 839 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 AP4E1Q9UPM8 1137 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 DRG1Q9Y295 367 aaKnown RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 SOAT2O75908 522 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 ASLP04424 464 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 IFNA16P05015 189 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 RBP1P09455 135 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 RARBP10826 455 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 CHRM3P20309 590 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 EIF4BP23588 611 aaKnown RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 KLF10Q13118 480 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 BAATQ14032 418 aaPredicted RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 LINC00523Q86TU6 105 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 BBS7Q8IWZ6 715 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 ZHX1-C8orf76Q96EF9 292 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 APOL5Q9BWW9 433 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 TEX13BQ9BXU2 312 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 TRIM54Q9BYV2 358 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 WDR12Q9GZL7 423 aaKnown RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 WDR55Q9H6Y2 383 aaPredicted RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 SPAG4Q9NPE6 437 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 ANKEF1Q9NU02 776 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 EGFL7Q9UHF1 273 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 RNF112Q9ULX5 631 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 SNAP91O60641 907 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 FAM155BO75949 473 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 LSM8O95777 96 aaKnown RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 S100A6P06703 90 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 CCNB1P14635 433 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 MIPP30301 263 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 HPCAP84074 193 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 KCNMB4Q86W47 210 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 TAMM41Q96BW9 452 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 HPDLQ96IR7 371 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 APOL4Q9BPW4 351 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 SLC7A8Q9UHI5 535 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 PPM1HQ9ULR3 514 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 ERI2A8K979 691 aaKnown RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 CYB561D2O14569 222 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 MAGEB2O15479 319 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 PGAM1P18669 254 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 PTGIRP43119 386 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 MAMLD1Q13495 774 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 FRG1Q14331 258 aaKnown RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 FAM120BQ96EK7 910 aaKnown RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 VCPIP1Q96JH7 1222 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 MLPHQ9BV36 600 aaPredicted RBP12.92□□□□□ -0.34
GPC4-201ENST00000370828 ITGA11Q9UKX5 1188 aa12.92□□□□□ -0.34
GPC4-201ENST00000370828 C5orf58C9J3I9 102 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 TFECO14948 347 aaPredicted RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 MTSS1O43312 755 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 CCNT2O60583 730 aaKnown RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 JCHAINP01591 159 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 BPGMP07738 259 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 ZNF24P17028 368 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 GCNT1Q02742 428 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 TTC23Q5W5X9 447 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 BTBD8Q5XKL5 378 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 PAGE2Q7Z2X7 111 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 LRRC49Q8IUZ0 686 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 SETD9Q8NE22 299 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 FBXO30Q8TB52 745 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 CPNE1Q99829 537 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 NEXMIFQ5QGS0 1516 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 H3BNX3 289 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 HDAC3O15379 428 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 ZNF12P17014 697 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 KDELR1P24390 212 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 SPRED3Q2MJR0 410 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 VWA5B1Q5TIE3 1220 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 PALB2Q86YC2 1186 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 ZNF276Q8N554 614 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms