RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 DEUP1Q05D60 604 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 QPCTQ16769 361 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 MIB1Q86YT6 1006 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 LRRN4Q8WUT4 740 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 PGAP3Q96FM1 320 aaPredicted RBP17.79■□□□□ 0.44
UBE3D-203ENST00000369747 ZNF317Q96PQ6 595 aaPredicted RBP17.79■□□□□ 0.44
UBE3D-203ENST00000369747 NOTCH4Q99466 2003 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 PRKD2Q9BZL6 878 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 WDR6Q9NNW5 1121 aaKnown RBP17.79■□□□□ 0.44
UBE3D-203ENST00000369747 ASAH2Q9NR71 780 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 TMPRSS4Q9NRS4 437 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.79■□□□□ 0.44
UBE3D-203ENST00000369747 PAK5Q9P286 719 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 MTCH2Q9Y6C9 303 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 TMEM120BA0PK00 339 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 C5orf60A6NFR6 353 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 ZFXP17010 805 aaPredicted RBP17.78■□□□□ 0.44
UBE3D-203ENST00000369747 GOT1P17174 413 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 NTHL1P78549 312 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 CYP4F8P98187 520 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 EIF4EBP2Q13542 120 aaPredicted RBP17.78■□□□□ 0.44
UBE3D-203ENST00000369747 TXNDC8Q6A555 127 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 MSANTD2Q6P1R3 559 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 GRASPQ7Z6J2 395 aaPredicted RBP17.78■□□□□ 0.44
UBE3D-203ENST00000369747 PYROXD1Q8WU10 500 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 CYP2S1Q96SQ9 504 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 RNF38Q9H0F5 515 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 CCDC134Q9H6E4 229 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 ANLNQ9NQW6 1124 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 RRN3Q9NYV6 651 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 I6L893 689 aaPredicted RBP17.78■□□□□ 0.44
UBE3D-203ENST00000369747 CHADO15335 359 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 COCHO43405 550 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 XYLBO75191 536 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 RHOP08100 348 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 PTPN2P17706 415 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 DRD4P21917 467 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 MTM1Q13496 603 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 TMED2Q15363 201 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 SLC5A9Q2M3M2 681 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 HECTD3Q5T447 861 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 STXBP5Q5T5C0 1151 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 NCBP2-AS2Q69YL0 99 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 TADA2BQ86TJ2 420 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 PSTKQ8IV42 348 aaKnown RBP17.78■□□□□ 0.44
UBE3D-203ENST00000369747 PDIK1LQ8N165 341 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 ATP11CQ8NB49 1132 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 FBXO36Q8NEA4 188 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 TCEAL4Q96EI5 215 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 CHMP6Q96FZ7 201 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 SLC22A12Q96S37 553 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 PRMT1Q99873 361 aaKnown RBP17.78■□□□□ 0.44
UBE3D-203ENST00000369747 APOL5Q9BWW9 433 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 ATXN3LQ9H3M9 355 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 ETNK2Q9NVF9 386 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 MARCH2Q9P0N8 246 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 CDH22Q9UJ99 828 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 MFHAS1Q9Y4C4 1052 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 ACTL7BQ9Y614 415 aa17.78■□□□□ 0.44
UBE3D-203ENST00000369747 DENND4CQ5VZ89 1909 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 POC1B-GALNT4F8VUJ3 575 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 IRAK2O43187 625 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 OAS1P00973 400 aaKnown RBP17.77■□□□□ 0.44
UBE3D-203ENST00000369747 BRAFP15056 766 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 IGFBP4P22692 258 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 AMPD1P23109 780 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 SSTR1P30872 391 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 PPP3CCP48454 512 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 NR2C2P49116 596 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 EPHA5P54756 1037 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 XRCC4Q13426 336 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 MPP2Q14168 576 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 BBS9Q3SYG4 887 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 PABPC1LQ4VXU2 614 aaKnown RBP17.77■□□□□ 0.44
UBE3D-203ENST00000369747 ELMSAN1Q6PJG2 1045 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 CDKL3Q8IVW4 592 aaPredicted RBP17.77■□□□□ 0.44
UBE3D-203ENST00000369747 EFHBQ8N7U6 833 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 RAB6BQ9NRW1 208 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 LMCD1Q9NZU5 365 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 RABGEF1Q9UJ41 708 aa17.77■□□□□ 0.44
UBE3D-203ENST00000369747 MYO18AQ92614 2054 aaKnown RBP17.77■□□□□ 0.44
UBE3D-203ENST00000369747 ATP5C1P36542 298 aaKnown RBP17.76■□□□□ 0.43
UBE3D-203ENST00000369747 CXCR3P49682 368 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 SLC45A4Q5BKX6 768 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 EFHC2Q5JST6 749 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 SYCP2LQ5T4T6 812 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 SRRM1Q8IYB3 904 aaKnown RBP17.76■□□□□ 0.43
UBE3D-203ENST00000369747 QKIQ96PU8 341 aaKnown RBP eCLIP17.76■□□□□ 0.43
UBE3D-203ENST00000369747 NACA2Q9H009 215 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 SFXN1Q9H9B4 322 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 TRPC7Q9HCX4 862 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 OLA1Q9NTK5 396 aaKnown RBP17.76■□□□□ 0.43
UBE3D-203ENST00000369747 DTLQ9NZJ0 730 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 RCOR3Q9P2K3 495 aaPredicted RBP17.76■□□□□ 0.43
UBE3D-203ENST00000369747 COL6A3P12111 3177 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 BRWD1Q9NSI6 2320 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 C2orf16Q68DN1 1984 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 MOSPD3O75425 235 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 F9P00740 461 aa17.76■□□□□ 0.43
UBE3D-203ENST00000369747 ARL4AP40617 200 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms