RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 MTFR1Q15390 333 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 LRRC23Q53EV4 343 aaPredicted RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 TFAP2DQ7Z6R9 452 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 LRRC43Q8N309 656 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 MIPOL1Q8TD10 442 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF398Q8TD17 642 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 KCTD13Q8WZ19 329 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF75CPQ92670 426 aaPredicted RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 P2RY11Q96G91 374 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF558Q96NG5 402 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 TWNKQ96RR1 684 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 KCNK16Q96T55 309 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 POLR1EQ9GZS1 481 aaKnown RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 DPEP3Q9H4B8 488 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SYTL2Q9HCH5 934 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SCUBE2Q9NQ36 999 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 THAP1Q9NVV9 213 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 UBP1Q9NZI7 540 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CTNNAL1Q9UBT7 734 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 LGALS13Q9UHV8 139 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 DNMT3LQ9UJW3 386 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 STARD13Q9Y3M8 1113 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 MYH9P35579 1960 aaKnown RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 NEMP1O14524 444 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SOAT2O75908 522 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 RHOBTB1O94844 696 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 COL6A1P12109 1028 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 DAOAP59103 153 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 KDSRQ06136 332 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC12A1Q13621 1099 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 POU6F1Q14863 301 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 PDK4Q16654 411 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 HSP90AA5PQ58FG0 334 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 HECTD3Q5T447 861 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 PTRHD1Q6GMV3 140 aaKnown RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 ZDHHC24Q6UX98 284 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 LRRC8DQ7L1W4 858 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC35F5Q8WV83 523 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 NTAN1Q96AB6 310 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 PPWD1Q96BP3 646 aaKnown RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 TLCD1Q96CP7 247 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CERS2Q96G23 380 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 PCED1BQ96HM7 432 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 FUBP3Q96I24 572 aaKnown RBP eCLIP5.43□□□□□ -1.544e-7■■■□□ 15.4
SMNDC1-202ENST00000369603 LGMNQ99538 433 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SDCBP2Q9H190 292 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 NCKIPSDQ9NZQ3 722 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 LMCD1Q9NZU5 365 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 HMGXB4Q9UGU5 601 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 VPS28Q9UK41 221 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 A0A0U1RQF3 1178 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TCRBV9S1A1TA0A576 114 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 B2RBV5 119 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SNX3O60493 162 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 EFCAB14O75071 495 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 VPS26AO75436 327 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TCEA3O75764 348 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 BGNP21810 368 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 LMO2P25791 158 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 LRPAP1P30533 357 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ACLYP53396 1101 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CSE1LP55060 971 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ABCE1P61221 599 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ELF3P78545 371 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 GBE1Q04446 702 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 OVGP1Q12889 678 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ARHGEF7Q14155 803 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TTLL9Q3SXZ7 439 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 N4BP2L1Q5TBK1 243 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 LRRC8BQ6P9F7 803 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 C16orf89Q6UX73 402 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ANKS1BQ7Z6G8 1248 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 LONP2Q86WA8 852 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TTC30AQ86WT1 665 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 MFN1Q8IWA4 741 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 LGI2Q8N0V4 545 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF557Q8N988 423 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 KCTD15Q96SI1 283 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SENP6Q9GZR1 1112 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ATP13A1Q9HD20 1204 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DYRK4Q9NR20 520 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 RUVBL2Q9Y230 463 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 C15orf41Q9Y2V0 281 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 KAT6AQ92794 2004 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SBF2Q86WG5 1849 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 A0A096LPK6 155 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF487B1APH4 448 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TRIM13O60858 407 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DDHD2O94830 711 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CFHP08603 1231 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 HIST1H2AGP0C0S8 130 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 NFKB1P19838 968 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 HIST1H2ADP20671 130 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CALB2P22676 271 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ADRA1DP25100 572 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SERPINH1P50454 418 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 RHOAP61586 193 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 KLC1Q07866 573 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CUL3Q13618 768 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms