RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 PDGFRAP16234 1089 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 TYK2P29597 1187 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 GPD2P43304 727 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 NR2C2P49116 596 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 EFNA5P52803 228 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 PTPN11Q06124 597 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-203ENST00000368690 CEACAM7Q14002 265 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 STILQ15468 1287 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 GRTP1Q5TC63 336 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 LRRC8BQ6P9F7 803 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 CARM1Q86X55 608 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 TOP1MTQ969P6 601 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 NIFKQ9BYG3 293 aaKnown RBP17.8■□□□□ 0.44
CHTOP-203ENST00000368690 OSBPL6Q9BZF3 934 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 RNPEPQ9H4A4 650 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 VPS45Q9NRW7 570 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 MTMR10Q9NXD2 777 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 CPSF3Q9UKF6 684 aaKnown RBP17.8■□□□□ 0.44
CHTOP-203ENST00000368690 FAF1Q9UNN5 650 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-203ENST00000368690 RNF11Q9Y3C5 154 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 MAFBQ9Y5Q3 323 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-203ENST00000368690 CCL15-CCL14A0A0B4J2E2 113 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 WDR27A2RRH5 827 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 H3BNH8 94 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 B4GALT4O60513 344 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 CBFA2T3O75081 653 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 BMP10O95393 424 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 TNNC2P02585 160 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 OATP04181 439 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 HOXC6P09630 235 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 GP5P40197 560 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 PHEXP78562 749 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 CCL15Q16663 113 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 TRNP1Q6NT89 227 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 LPCAT2Q7L5N7 544 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 HACE1Q8IYU2 909 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 TDRD5Q8NAT2 981 aaKnown RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 CHST13Q8NET6 341 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 SLC7A14Q8TBB6 771 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 MAPK15Q8TD08 544 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 QKIQ96PU8 341 aaKnown RBP eCLIP17.79■□□□□ 0.441e-6■■□□□ 14.3
CHTOP-203ENST00000368690 CPNE1Q99829 537 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 MRPL4Q9BYD3 311 aaKnown RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 PRDM16Q9HAZ2 1276 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 MRPL40Q9NQ50 206 aaKnown RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 RRN3Q9NYV6 651 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 MID2Q9UJV3 735 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 WDR37Q9Y2I8 494 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 MATN2O00339 956 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 ADCY6O43306 1168 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 SERPINB5P36952 375 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 PPARGP37231 505 aaPredicted RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 PSMD8P48556 350 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 GTF2A2P52657 109 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 MS4A2Q01362 244 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 PDAP1Q13442 181 aaKnown RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 SH3PXD2AQ5TCZ1 1133 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 PATL1Q86TB9 770 aaKnown RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 CNTD1Q8N815 330 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 OR52B2Q96RD2 323 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 ILKAPQ9H0C8 392 aaPredicted RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 MAN1C1Q9NR34 630 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 PNPLA3Q9NST1 481 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 TUBA8Q9NY65 449 aaPredicted RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 IGSF9Q9P2J2 1179 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 EPS15L1Q9UBC2 864 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 PAIP2BQ9ULR5 123 aaKnown RBP17.79■□□□□ 0.44
CHTOP-203ENST00000368690 MYRFQ9Y2G1 1151 aa17.79■□□□□ 0.44
CHTOP-203ENST00000368690 UNCXA6NJT0 531 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 TRIM13O60858 407 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 PRKAA2P54646 552 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 HUNKP57058 714 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 PPP2R5DQ14738 602 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 MGAT5BQ3V5L5 792 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 CST9Q5W186 159 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 PAOXQ6QHF9 649 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 RIOX2Q8IUF8 465 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 GALNT4Q8N4A0 578 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 NSUN6Q8TEA1 469 aaKnown RBP17.78■□□□□ 0.44
CHTOP-203ENST00000368690 HSPBAP1Q96EW2 488 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 ANKRD36BP1Q96IX9 119 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 VPS50Q96JG6 964 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 WDR41Q9HAD4 459 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 EFCAB1Q9HAE3 211 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 TXNRD2Q9NNW7 524 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 HACD3Q9P035 362 aa17.78■□□□□ 0.44
CHTOP-203ENST00000368690 MYOCOSA0A1B0GUC4 107 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 TRIM64CA6NLI5 447 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 FAM155AB1AL88 458 aaPredicted RBP17.77■□□□□ 0.44
CHTOP-203ENST00000368690 HDAC3O15379 428 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 TRPA1O75762 1119 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 RGS20O76081 388 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 GRIA1P42261 906 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 TFAMQ00059 246 aaKnown RBP17.77■□□□□ 0.44
CHTOP-203ENST00000368690 SLC10A2Q12908 348 aaPredicted RBP17.77■□□□□ 0.44
CHTOP-203ENST00000368690 CAPSQ13938 189 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 C15orf59Q2T9L4 293 aaPredicted RBP17.77■□□□□ 0.44
CHTOP-203ENST00000368690 SLC44A4Q53GD3 710 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 ZNF667Q5HYK9 610 aa17.77■□□□□ 0.44
CHTOP-203ENST00000368690 RWDD4Q6NW29 188 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms