RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 APCDD1Q8J025 514 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 CYB5D2Q8WUJ1 264 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 ALG14Q96F25 216 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 SIPA1Q96FS4 1042 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 SPACA7Q96KW9 195 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 MKRN2Q9H000 416 aaKnown RBP10.15□□□□□ -0.78
CD48-202ENST00000368046 ISCUQ9H1K1 167 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 OSBPL2Q9H1P3 480 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 ARRDC1-AS1Q9H2J1 176 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 PRDM16Q9HAZ2 1276 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 TMPRSS4Q9NRS4 437 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 PARVAQ9NVD7 372 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 TAS2R14Q9NYV8 317 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 ERVW-1Q9UQF0 538 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 PCDHGA5Q9Y5G8 931 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 VPS13AQ96RL7 3174 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 ITIH6Q6UXX5 1313 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 IGLV3-10A0A075B6K4 115 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 TARSL2A2RTX5 802 aaKnown RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 E9PAM4 449 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 FOXD2O60548 495 aaPredicted RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 CNTN5O94779 1100 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 EPN2O95208 641 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 SERPING1P05155 500 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 HLA-EP13747 358 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 PRKCHP24723 683 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 MZF1P28698 734 aaPredicted RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 CASP14P31944 242 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 GGCXP38435 758 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 COPAP53621 1224 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 HDAC4P56524 1084 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 RPL7AP62424 266 aaKnown RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 NRG1Q02297 640 aaPredicted RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 SPEM2Q0P670 501 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 MAMLD1Q13495 774 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 ARID5BQ14865 1188 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 CSRP2Q16527 193 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 RAB6CQ53S08 254 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 PMS2CLQ68D20 193 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 CXorf57Q6NSI4 855 aaKnown RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 SETD3Q86TU7 594 aaPredicted RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 VPS36Q86VN1 386 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 CIR1Q86X95 450 aaPredicted RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 KIAA2013Q8IYS2 634 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 FRMD1Q8N878 549 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 RNF214Q8ND24 703 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 OR2T3Q8NH03 318 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 FAM172AQ8WUF8 416 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 PRCCQ92733 491 aaPredicted RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 ERLEC1Q96DZ1 483 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 MYO19Q96H55 970 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 MRGPRX3Q96LB0 322 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 FEM1AQ9BSK4 669 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 CNPY3Q9BT09 278 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 RAB6CQ9H0N0 254 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 RETREG1Q9H6L5 497 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 PRSS16Q9NQE7 514 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 SEMA4GQ9NTN9 838 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 PPARGC1AQ9UBK2 798 aaKnown RBP10.14□□□□□ -0.79
CD48-202ENST00000368046 OR12D3Q9UGF7 316 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 ADAMTS1Q9UHI8 967 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 SLCO3A1Q9UIG8 710 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 OR51B4Q9Y5P0 310 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 WDR87Q6ZQQ6 2873 aa10.14□□□□□ -0.79
CD48-202ENST00000368046 ATG2BQ96BY7 2078 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 FANCMQ8IYD8 2048 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 IGHV1OR15-9A0A0B4J2B8 117 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 BCLAF3A2AJT9 711 aaKnown RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 TMEM191CA6NGB0 347 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 AP5Z1O43299 807 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 GYPCP04921 128 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 ZNF806P0C7X5 589 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 ACADMP11310 421 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 DESP17661 470 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 BCKDHBP21953 392 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 OXTRP30559 389 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 HNRNPH3P31942 346 aaKnown RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 CTSOP43234 321 aaPredicted RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 IRAK1P51617 712 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 ZBTB16Q05516 673 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 HNRNPA1L2Q32P51 320 aaKnown RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 ALFQ53S48 1182 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 TDRD12Q587J7 1177 aaKnown RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 C6orf118Q5T5N4 469 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 RNF219Q5W0B1 726 aaPredicted RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 SPECC1LQ69YQ0 1117 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 SCYL2Q6P3W7 929 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 KIAA1324Q6UXG2 1013 aaKnown RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 LPCAT2Q7L5N7 544 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 SLFN11Q7Z7L1 901 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 OR8K1Q8NGG5 319 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 OR52K2Q8NGK3 314 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 NTAN1Q96AB6 310 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 TRIM11Q96F44 468 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 RPL10LQ96L21 214 aaKnown RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 MCEEQ96PE7 176 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.13□□□□□ -0.79
CD48-202ENST00000368046 ZYG11BQ9C0D3 744 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 SLC6A17Q9H1V8 727 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 FBRSQ9HAH7 460 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms