RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 WIZO95785 1651 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 VWA3AA6NCI4 1184 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 C2orf81A6NN90 581 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 LARGE1O95461 756 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 USP4Q13107 963 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 FKBP1CQ5VVH2 108 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 AKAP14Q86UN6 197 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ADPGKQ9BRR6 497 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MLXQ9UH92 298 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 OCM2P0CE71 109 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 OCMP0CE72 109 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CD97P48960 835 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TGM3Q08188 693 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 GALNT12Q8IXK2 581 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SLC20A1Q8WUM9 679 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ZKSCAN4Q969J2 545 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ASIC4Q96FT7 647 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHA4Q9UN74 947 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 HPSEQ9Y251 543 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CYP3A7-CYP3A51PA0A087WV96 503 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 STX16-NPEPL1H3BU86 382 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CYP3A7P24462 503 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 S100GP29377 79 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 S100A7P31151 101 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 BST2Q10589 180 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SLC22A10Q63ZE4 541 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TMC3Q7Z5M5 1100 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CYP4Z1Q86W10 505 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NT5C1BQ96P26 610 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PPP1R10Q96QC0 940 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NDNQ99608 321 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MMTAG2Q9BU76 263 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TRPS1Q9UHF7 1281 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHA5Q9Y5H7 936 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 A0A1W2PQ72 361 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 UNCXA6NJT0 531 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PCCAP05165 728 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 STARP49675 285 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ZMYND11Q15326 602 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TTLL6Q8N841 843 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 RASGRP4Q8TDF6 673 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 RORBQ92753 470 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TTLL3Q9Y4R7 772 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 A0A1W2PQ67 120 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ADAMDEC1O15204 470 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ADORA1P30542 326 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ACTR3P61158 418 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CCSAPQ6IQ19 270 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 FNDC8Q8TC99 324 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 C11orf24Q96F05 449 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 AGAP3Q96P47 875 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 DEPDC7Q96QD5 511 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TEFMQ96QE5 360 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PRMT1Q99873 361 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CPVLQ9H3G5 476 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NIPAL2Q9H841 368 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 C14orf166Q9Y224 244 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 HMGN1P05114 100 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NECTIN1Q15223 517 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FAXCQ5TGI0 409 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 UNC5AQ6ZN44 842 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FASTKD5Q7L8L6 764 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NIPA1Q7RTP0 329 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FAM160B2Q86V87 743 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TCAIMQ8N3R3 496 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RTKNQ9BST9 563 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TLR7Q9NYK1 1049 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 KCNN3Q9UGI6 736 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 WARS2Q9UGM6 360 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ATP5OP48047 213 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ELF3P78545 371 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 REEP5Q00765 189 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SLC14A2Q15849 920 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FAM76BQ5HYJ3 339 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ASPGQ86U10 573 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PROSER1Q86XN7 944 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 DCUN1D3Q8IWE4 304 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PBDC1Q9BVG4 233 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SH2B2O14492 632 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SCO1O75880 301 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TYRP14679 529 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CYP2J2P51589 502 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SELPLGQ14242 412 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ATP13A5Q4VNC0 1218 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SLC45A3Q96JT2 553 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 QRFPRQ96P65 431 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RBM15Q96T37 977 aaKnown RBP eCLIP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RSPH9Q9H1X1 276 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC19Q9H756 370 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 IL1RAPQ9NPH3 570 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CPS1P31327 1500 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 A6NJR5 290 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PEX11AO75192 247 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 UGT2B11O75310 529 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 GSTT2BP0CG30 244 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RENBPP51606 427 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 EIF4HQ15056 248 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RTL6Q6ICC9 239 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SIRT2Q8IXJ6 389 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CCDC107Q8WV48 283 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms