RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 RWDD2AQ9UIY3 292 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 BARX2Q9UMQ3 279 aaPredicted RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 CNTNAP2Q9UHC6 1331 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 ABCC6O95255 1503 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 GRID2IPA4D2P6 1211 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 DUSP11O75319 330 aaKnown RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 AGTP01019 485 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 PDGFRBP09619 1106 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 HDCP19113 662 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 MSH3P20585 1137 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 KCNA5P22460 613 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 ATXN1P54253 815 aaKnown RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 ILF3Q12906 894 aaKnown RBP eCLIP8.8□□□□□ -1
SYNE1-206ENST00000367253 VGLL4Q14135 290 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 SEMA3AQ14563 771 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 RABL6Q3YEC7 729 aaPredicted RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 EPC2Q52LR7 807 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 TRIM65Q6PJ69 517 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 PPM1NQ8N819 430 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 KLRG1Q96E93 195 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 SEC16BQ96JE7 1060 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 ART5Q96L15 291 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 TRMT61BQ9BVS5 477 aaKnown RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 TMEM117Q9H0C3 514 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 GOLPH3LQ9H4A5 285 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 THAP9Q9H5L6 903 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 TTLL8A6PVC2 850 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 BTBD18B2RXH4 712 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 O00370 1275 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 RGS12O14924 1447 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 TBX3O15119 743 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 TSPAN1O60635 241 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 AKR1B1P15121 316 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 CSE1LP55060 971 aaKnown RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 PSMC6P62333 389 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 MRPS6P82932 125 aaKnown RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 ITGADQ13349 1161 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 TSNQ15631 228 aaKnown RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 BORAQ6PGQ7 559 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 FGD2Q7Z6J4 655 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 OTULINQ96BN8 352 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 LURAP1Q96LR2 239 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 BARD1Q99728 777 aaKnown RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 ISCA1Q9BUE6 129 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 KCNN2Q9H2S1 579 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 PHPT1Q9NRX4 125 aaPredicted RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 TMEM161AQ9NX61 479 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 CTNNAL1Q9UBT7 734 aa8.8□□□□□ -1
SYNE1-206ENST00000367253 SMG5Q9UPR3 1016 aaKnown RBP8.8□□□□□ -1
SYNE1-206ENST00000367253 CLEC3AO75596 197 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ALBP02768 609 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 GTF2H1P32780 548 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 PRIM2P49643 509 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 RPS6P62753 249 aaKnown RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 MRPS5P82675 430 aaKnown RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 ACOX1Q15067 660 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ISLR2Q6UXK2 745 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 POMGNT2Q8NAT1 580 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ANKRD27Q96NW4 1050 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 TBCDQ9BTW9 1192 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 THTPAQ9BU02 230 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ELOVL4Q9GZR5 314 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 DHX35Q9H5Z1 703 aaKnown RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 DCP1AQ9NPI6 582 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 TOPAZ1Q8N9V7 1692 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 CCT8L1PA6NM43 557 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 F8VZ95 297 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 QSOX1O00391 747 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ENTPD5O75356 428 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 PIK3CBP42338 1070 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 NPTX2P47972 431 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 RCAN1P53805 252 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 TLE2Q04725 743 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 TRIP4Q15650 581 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 FAM189A2Q15884 450 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 SETMARQ53H47 684 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 ZMYM1Q5SVZ6 1142 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 FAM102AQ5T9C2 384 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 CYP4V2Q6ZWL3 525 aaPredicted RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 IKBIPQ70UQ0 350 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 CYP4X1Q8N118 509 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 RASGEF1AQ8N9B8 481 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 GIPC3Q8TF64 312 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 HLA-CQ95604 372 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 PFDN5Q99471 154 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ERP44Q9BS26 406 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ALKBH4Q9NXW9 302 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 POLR1DQ9Y2S0 133 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 FAM32AQ9Y421 112 aaKnown RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 CLIC4Q9Y696 253 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 A0A0J9YVX5 310 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 OR6C75A6NL08 312 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 CENPXA8MT69 81 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 C9IYK1 514 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 TRIM13O60858 407 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 TDP2O95551 362 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ATP4AP20648 1035 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 ALDH18A1P54886 795 aaKnown RBP8.79□□□□□ -1
SYNE1-206ENST00000367253 CYP24A1Q07973 514 aa8.79□□□□□ -1
SYNE1-206ENST00000367253 CNKSR3Q6P9H4 555 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms