RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 POU2F2P09086 479 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 SNHG28P0DPA3 235 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 GNAT2P19087 354 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 AK2P54819 239 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 GTF2H3Q13889 308 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 GRASPQ7Z6J2 395 aaPredicted RBP8.02□□□□□ -1.13
H3F3A-201ENST00000366813 WDR75Q8IWA0 830 aaKnown RBP8.02□□□□□ -1.13
H3F3A-201ENST00000366813 ADGRF4Q8IZF3 695 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 NME8Q8N427 588 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 ZNF843Q8N446 348 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 CHCHD4Q8N4Q1 142 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 LILRA3Q8N6C8 439 aaPredicted RBP8.02□□□□□ -1.13
H3F3A-201ENST00000366813 ZNF480Q8WV37 535 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 FGF13Q92913 245 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 INPP4AQ96PE3 977 aaPredicted RBP8.02□□□□□ -1.13
H3F3A-201ENST00000366813 TEX15Q9BXT5 2789 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 PLA2G2FQ9BZM2 168 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 NAPBQ9H115 298 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 NRDE2Q9H7Z3 1164 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 VPS45Q9NRW7 570 aa8.02□□□□□ -1.13
H3F3A-201ENST00000366813 MRPL17Q9NRX2 175 aaKnown RBP8.02□□□□□ -1.13
H3F3A-201ENST00000366813 ZFP37Q9Y6Q3 630 aaPredicted RBP8.02□□□□□ -1.13
H3F3A-201ENST00000366813 FAM171A2A8MVW0 826 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 FIBPO43427 364 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 RAMP2O60895 175 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 LPOP22079 712 aaPredicted RBP8.01□□□□□ -1.13
H3F3A-201ENST00000366813 ECHS1P30084 290 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 SLC11A1P49279 550 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 GHRHRQ02643 423 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 MLC1Q15049 377 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 C3orf36Q3SXR2 165 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 LONRF3Q496Y0 759 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 MTHFD1LQ6UB35 978 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 MTSS1LQ765P7 747 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 EPM2AIP1Q7L775 607 aaPredicted RBP8.01□□□□□ -1.13
H3F3A-201ENST00000366813 CACNA2D4Q7Z3S7 1137 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 PALB2Q86YC2 1186 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 LDLRAD3Q86YD5 345 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 KIAA0319LQ8IZA0 1049 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 TMEM57Q8N5G2 664 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 SEPT1Q8WYJ6 367 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 HDAC10Q969S8 669 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 PCYT2Q99447 389 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 GTPBP4Q9BZE4 634 aaKnown RBP8.01□□□□□ -1.13
H3F3A-201ENST00000366813 NACAP1Q9BZK3 213 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 SMARCAD1Q9H4L7 1026 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 DNAJB4Q9UDY4 337 aa8.01□□□□□ -1.13
H3F3A-201ENST00000366813 COL12A1Q99715 3063 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 PCNX2A6NKB5 2137 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 LNP1A1A4G5 178 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 GOLGA6L6A8MZA4 724 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 DHX16O60231 1041 aaKnown RBP8□□□□□ -1.13
H3F3A-201ENST00000366813 ATP9AO75110 1047 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 CHRNB1P11230 501 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 PDCP20941 246 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 KLRC1P26715 233 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 PXNP49023 591 aaPredicted RBP8□□□□□ -1.13
H3F3A-201ENST00000366813 NPEPPSP55786 919 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 SIM1P81133 766 aaPredicted RBP8□□□□□ -1.13
H3F3A-201ENST00000366813 FAM43BQ6ZT52 329 aaPredicted RBP8□□□□□ -1.13
H3F3A-201ENST00000366813 ZNF627Q7L945 461 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 CATIPQ7Z7H3 387 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 ELOA2Q8IYF1 753 aaPredicted RBP8□□□□□ -1.13
H3F3A-201ENST00000366813 PRR18Q8N4B5 295 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 SPEM1Q8N4L4 309 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 ITFG1Q8TB96 612 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 MDM1Q8TC05 714 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 FAM3CQ92520 227 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 FRAT1Q92837 279 aaPredicted RBP8□□□□□ -1.13
H3F3A-201ENST00000366813 SEC62Q99442 399 aaKnown RBP8□□□□□ -1.13
H3F3A-201ENST00000366813 MRPL9Q9BYD2 267 aaKnown RBP8□□□□□ -1.13
H3F3A-201ENST00000366813 CLMPQ9H6B4 373 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 BCO1Q9HAY6 547 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 ANLNQ9NQW6 1124 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 TRPS1Q9UHF7 1281 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 PCDHGA5Q9Y5G8 931 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 SPAG17Q6Q759 2223 aa8□□□□□ -1.13
H3F3A-201ENST00000366813 SHROOM3Q8TF72 1996 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 ASCC3Q8N3C0 2202 aaKnown RBP7.99□□□□□ -1.13
H3F3A-201ENST00000366813 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
H3F3A-201ENST00000366813 CDX4O14627 284 aaPredicted RBP7.99□□□□□ -1.13
H3F3A-201ENST00000366813 NRP1O14786 923 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 RNF113AO15541 343 aaKnown RBP7.99□□□□□ -1.13
H3F3A-201ENST00000366813 RPP40O75818 363 aaKnown RBP7.99□□□□□ -1.13
H3F3A-201ENST00000366813 KRT38O76015 456 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 ENDOD1O94919 500 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 GASTP01350 101 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 GYPEP15421 78 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 CRHR1P34998 444 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 SLC6A9P48067 706 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 SLC25A3Q00325 362 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 DUSP2Q05923 314 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 GPATCH4Q5T3I0 446 aaKnown RBP7.99□□□□□ -1.13
H3F3A-201ENST00000366813 IFIT1BQ5T764 474 aaKnown RBP7.99□□□□□ -1.13
H3F3A-201ENST00000366813 CEP85Q6P2H3 762 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 Q6ZS52 159 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 USP45Q70EL2 814 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 C14orf80Q86SX3 495 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 WDR5BQ86VZ2 330 aa7.99□□□□□ -1.13
H3F3A-201ENST00000366813 ULK2Q8IYT8 1036 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms