RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 VCPIP1Q96JH7 1222 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 HSPA12BQ96MM6 686 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 PCDHB18PQ96TA0 734 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.59□□□□□ -0.87
MRPL55-216ENST00000366744 NUSAP1Q9BXS6 441 aaKnown RBP9.59□□□□□ -0.87
MRPL55-216ENST00000366744 ZYG11BQ9C0D3 744 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 SLC6A17Q9H1V8 727 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 TMEM245Q9H330 911 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 HAUS4Q9H6D7 363 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 MRPL47Q9HD33 250 aaKnown RBP9.59□□□□□ -0.87
MRPL55-216ENST00000366744 ZNHIT6Q9NWK9 470 aaKnown RBP9.59□□□□□ -0.87
MRPL55-216ENST00000366744 SUSD2Q9UGT4 822 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 HCN2Q9UL51 889 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 SCML1Q9UN30 329 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 NCKAP1Q9Y2A7 1128 aa9.59□□□□□ -0.87
MRPL55-216ENST00000366744 LUC7L2Q9Y383 392 aaKnown RBP9.59□□□□□ -0.87
MRPL55-216ENST00000366744 ITIH6Q6UXX5 1313 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 CACNA1AO00555 2505 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 CNOT1A5YKK6 2376 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 LAMA1P25391 3075 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 PLXNA2O75051 1894 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 SHROOM3Q8TF72 1996 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 IGHV1OR15-9A0A0B4J2B8 117 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 BCLAF3A2AJT9 711 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 SIGLEC16A6NMB1 481 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 CFIP05156 583 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 ZNF806P0C7X5 589 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 GNSP15586 552 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 PRKCIP41743 596 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 ZNF143P52747 638 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 ATXN3P54252 364 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 ELAVL3Q14576 367 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 PUM1Q14671 1186 aaKnown RBP eCLIP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 CCDC6Q16204 474 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 C15orf59Q2T9L4 293 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 HNRNPA1L2Q32P51 320 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 ACCSLQ4AC99 568 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 FSCBQ5H9T9 825 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 CXorf57Q6NSI4 855 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 SCYL2Q6P3W7 929 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 TMC6Q7Z403 805 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 SETD3Q86TU7 594 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 FAM124AQ86V42 546 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 ZNF354CQ86Y25 554 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 SYT12Q8IV01 421 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 MCOLN2Q8IZK6 566 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 DCAF4L2Q8NA75 395 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 JOSD2Q8TAC2 188 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 CEP76Q8TAP6 659 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 CPLX3Q8WVH0 158 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 SNX19Q92543 992 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 IGSF8Q969P0 613 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 TBC1D31Q96DN5 1066 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 MYEOVQ96EZ4 313 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 C1orf74Q96LT6 269 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 NAP1L5Q96NT1 182 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 EPAS1Q99814 870 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 CNPY3Q9BT09 278 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 ANP32EQ9BTT0 268 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 EDEM2Q9BV94 578 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 TTYH3Q9C0H2 523 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 MKRN2Q9H000 416 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 DEF6Q9H4E7 631 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 PARD6AQ9NPB6 346 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 AIPL1Q9NZN9 384 aa9.58□□□□□ -0.88
MRPL55-216ENST00000366744 USP36Q9P275 1121 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.58□□□□□ -0.88
MRPL55-216ENST00000366744 ATXN2Q99700 1313 aaKnown RBP9.57□□□□□ -0.88
MRPL55-216ENST00000366744 TARSL2A2RTX5 802 aaKnown RBP9.57□□□□□ -0.88
MRPL55-216ENST00000366744 C1QTNF3-AMACRE9PGA6 284 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 CCP110O43303 1012 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 ATMINO43313 823 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-216ENST00000366744 RTN2O75298 545 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 RNF8O76064 485 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 ADH1BP00325 375 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 SERPING1P05155 500 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 GZMAP12544 262 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 RRM1P23921 792 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 PSMA2P25787 234 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 RFC1P35251 1148 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-216ENST00000366744 ADRA1BP35368 520 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 CTSOP43234 321 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-216ENST00000366744 RECQLP46063 649 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-216ENST00000366744 PSMD8P48556 350 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 MAPKAPK2P49137 400 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 TPMTP51580 245 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 PLK1P53350 603 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 COPAP53621 1224 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 GEMIN4P57678 1058 aaKnown RBP9.57□□□□□ -0.88
MRPL55-216ENST00000366744 ZNF33AQ06730 810 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 PTP4A2Q12974 167 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 ARID5BQ14865 1188 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 NFKBIBQ15653 356 aa9.57□□□□□ -0.88
MRPL55-216ENST00000366744 RSPO4Q2I0M5 234 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-216ENST00000366744 CCDC14Q49A88 953 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms