RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 ALG10Q5BKT4 473 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 ALG10BQ5I7T1 473 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 ENTPD8Q5MY95 495 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 SEL1L3Q68CR1 1132 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 ZNF776Q68DI1 518 aaPredicted RBP0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 PAQR6Q6TCH4 344 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 FKBP9P1Q75LS8 142 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 ZNF280BQ86YH2 543 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 PGBD5Q8N414 524 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 KCNH5Q8NCM2 988 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 ABCF1Q8NE71 845 aaKnown RBP eCLIP0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 OR1N1Q8NGS0 311 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 ZFPM2Q8WW38 1151 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 PPP2R3CQ969Q6 453 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 HDAC10Q969S8 669 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 ARID3AQ99856 593 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 VRK1Q99986 396 aaPredicted RBP0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 RPP25Q9BUL9 199 aaKnown RBP0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 CCDC113Q9H0I3 377 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 SLC25A18Q9H1K4 315 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 LRRC4Q9HBW1 653 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 NKX1-2Q9UD57 310 aaPredicted RBP0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 CACNG5Q9UF02 275 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 MSRB2Q9Y3D2 182 aa0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 SRPRBQ9Y5M8 271 aaKnown RBP0.07□□□□□ -2.4
RNU6-478P-201ENST00000363904 A0A087WWL8 130 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 GOLGA8AA7E2F4 631 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 STMND1H3BQB6 276 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 ZEB2O60315 1214 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 SOX30O94993 753 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 ALDH2P05091 517 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 RPLP2P05387 115 aaKnown RBP0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 FGRP09769 529 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 OSMP13725 252 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 GNB3P16520 340 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 ITIH1P19827 911 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 UBA1P22314 1058 aaKnown RBP0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 KLRC1P26715 233 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 HOXD12P35452 270 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 TIRAPP58753 221 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 NFE2L2Q16236 605 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 KHDC1Q4VXA5 237 aaKnown RBP0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 HERC4Q5GLZ8 1057 aaPredicted RBP0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 SFMBT2Q5VUG0 894 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 IRAK1BP1Q5VVH5 260 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 WSCD1Q658N2 575 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 PPP4R3AQ6IN85 833 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 TYW3Q6IPR3 259 aaKnown RBP0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 SLC24A4Q8NFF2 622 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 OR2T6Q8NHC8 308 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 TMEM190Q8WZ59 177 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 HERVK_113Q902F9 699 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 PKP2Q99959 881 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 MGME1Q9BQP7 344 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 LDHAL6BQ9BYZ2 381 aaPredicted RBP0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 EMC7Q9NPA0 242 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 KCNMB3Q9NPA1 279 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 NIPSNAP3AQ9UFN0 247 aaPredicted RBP0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 PHTF1Q9UMS5 762 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 PLAAQ9Y263 795 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 VDAC3Q9Y277 283 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 EXOGQ9Y2C4 368 aaKnown RBP0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 SPATA31A5Q5VU36 1347 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 SPATA31A7Q8IWB4 1347 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 FER1L4A9Z1Z3 1794 aa0.06□□□□□ -2.4
RNU6-478P-201ENST00000363904 CFAP69A5D8W1 941 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 A8MVJ9 347 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 SMIM1B2RUZ4 78 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 NT5C1B-RDH14C9J2C7 533 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 RASA4BC9J798 803 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 DVL1O14640 695 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 CA12O43570 354 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 LDB2O43679 373 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 CEP104O60308 925 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 CAVIN2O95810 425 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 TPOP07202 933 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 GRPP07492 148 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 TRIM49P0CI25 452 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 TRIM49CP0CI26 452 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 TMIGD3P0DMS9 266 aaPredicted RBP0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 XRCC6P12956 609 aaKnown RBP eCLIP0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 ENO3P13929 434 aaPredicted RBP0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 ATP6V1B1P15313 513 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 CD53P19397 219 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 TYMPP19971 482 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 SDSP20132 328 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 GNLYP22749 145 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 HOXA13P31271 388 aaPredicted RBP0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 ADCYAP1R1P41586 468 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 LIFRP42702 1097 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 DVL1P1P54792 670 aaPredicted RBP0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 UCNP55089 124 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 HDLBPQ00341 1268 aaKnown RBP0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 SNAPC2Q13487 334 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 ZNF284Q2VY69 593 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 ATP13A4Q4VNC1 1196 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 NEK10Q6ZWH5 1172 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 ADGRD2Q7Z7M1 963 aa0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 TBC1D1Q86TI0 1168 aaPredicted RBP0.05□□□□□ -2.4
RNU6-478P-201ENST00000363904 P3H2Q8IVL5 708 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms