RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 DCXO43602 365 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ATG13O75143 517 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ZNF189O75820 626 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 KAT7O95251 611 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ASLP04424 464 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 CD48P09326 243 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 CISD3P0C7P0 127 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PYGMP11217 842 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 KRT10P13645 584 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PRLRP16471 622 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 TGM2P21980 687 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 IL4RP24394 825 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 HOXD9P28356 352 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 HOXC13P31276 330 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 CTHP32929 405 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 CDKN2BP42772 138 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SOX9P48436 509 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SGSHP51688 502 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PLK1P53350 603 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 DYNLT1P63172 113 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 KDSRQ06136 332 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SLC20A2Q08357 652 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SIGLEC14Q08ET2 396 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 LMAN2Q12907 356 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SEMA3BQ13214 749 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ZNF211Q13398 564 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 DPYSQ14117 519 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 UBXN2BQ14CS0 331 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 EIF4HQ15056 248 aaKnown RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PDK1Q15118 436 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PON2Q15165 354 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 LLGL1Q15334 1064 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 LONRF2Q1L5Z9 754 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PARP15Q460N3 678 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PITRM1Q5JRX3 1037 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 DNTTIP2Q5QJE6 756 aaKnown RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 TMCO4Q5TGY1 634 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 MANEALQ5VSG8 457 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 MBLAC2Q68D91 279 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 TIGD7Q6NT04 549 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SYT10Q6XYQ8 523 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 CYP4V2Q6ZWL3 525 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 METTL3Q86U44 580 aaKnown RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 NLRP14Q86W24 1093 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 CIR1Q86X95 450 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ZNF683Q8IZ20 524 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SIX5Q8N196 739 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 UMODL1-AS1Q8N2C9 162 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 C17orf53Q8N3J3 647 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 CCNYQ8ND76 341 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PCDH19Q8TAB3 1148 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 KCNV2Q8TDN2 545 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 EDAQ92838 391 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ACDQ96AP0 544 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 HAUS1Q96CS2 278 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 FAF2Q96CS3 445 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PRICKLE1Q96MT3 831 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 NECAB3Q96P71 396 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 PSMB7Q99436 277 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 FEM1AQ9BSK4 669 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 HEMGNQ9BXL5 484 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SLC39A8Q9C0K1 460 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 BRD8Q9H0E9 1235 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 LMAN1LQ9HAT1 526 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ATP13A1Q9HD20 1204 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 HOMER3Q9NSC5 361 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ABCB8Q9NUT2 735 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 ELOVL2Q9NXB9 296 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 RNF14Q9UBS8 474 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SUN2Q9UH99 717 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 GGA2Q9UJY4 613 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 FBXO10Q9UK96 956 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 NDRG2Q9UN36 371 aaKnown RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SLC27A6Q9Y2P4 619 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 FARP1Q9Y4F1 1045 aaPredicted RBP6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 HEY1Q9Y5J3 304 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 SAR1BQ9Y6B6 198 aa6.78□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 NOTCH4Q99466 2003 aa6.77□□□□□ -1.32
VTRNA3-1P-201ENST00000362552 MYO16Q9Y6X6 1858 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 ZNF638Q14966 1978 aaKnown RBP6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 C2orf16Q68DN1 1984 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 hCG_1818297A0A087WSY0 165 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 A0A0A0MRY4 1105 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 GOLGA6L10A0A0M3HER8 536 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 KANSL1LA0AUZ9 987 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 C3orf70A6NLC5 250 aaPredicted RBP6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 FAM170BA6NMN3 283 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 H7C0C1 242 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 CBX4O00257 560 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 CES2O00748 559 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 PPP1R12AO14974 1030 aaPredicted RBP6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 DCLK1O15075 740 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 KDELR3O43731 214 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 ATP1A1P05023 1023 aaKnown RBP6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 SRPRAP08240 638 aaKnown RBP6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 CXCR5P32302 372 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 CD70P32970 193 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 PTPN7P35236 360 aa6.77□□□□□ -1.33
VTRNA3-1P-201ENST00000362552 OPRD1P41143 372 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms