RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 BFSP2Q13515 415 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 CEACAM7Q14002 265 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PIGHQ14442 188 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF423Q2M1K9 1284 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PITRM1Q5JRX3 1037 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 AARS2Q5JTZ9 985 aaKnown RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 NANOGP8Q6NSW7 305 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 MAVSQ7Z434 540 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 KLHL32Q96NJ5 620 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 CLK4Q9HAZ1 481 aaKnown RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF839A8K0R7 811 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 ASNSP08243 561 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 KRT7P08729 469 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 GNAO1P09471 354 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 HSPA13P48723 471 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 PLCL1Q15111 1095 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 NFIL3Q16649 462 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 MGAT5BQ3V5L5 792 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 UNC5AQ6ZN44 842 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 TDRD5Q8NAT2 981 aaKnown RBP12.97□□□□□ -0.33
VAMP1-201ENST00000361716 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 HNRNPABQ99729 332 aaKnown RBP12.97□□□□□ -0.33
VAMP1-201ENST00000361716 IDI2Q9BXS1 227 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 AP4E1Q9UPM8 1137 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 GOLGA8TH3BQL2 631 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 TNNC2P02585 160 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 MMP8P22894 467 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 TCEA1P23193 301 aaKnown RBP12.97□□□□□ -0.33
VAMP1-201ENST00000361716 ABCE1P61221 599 aaKnown RBP12.97□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF252P-AS1Q0IIN9 211 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 AMHR2Q16671 573 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF618Q5T7W0 954 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 Q8N9G6 341 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-201ENST00000361716 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 MFSD14AQ96MC6 490 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 SOX17Q9H6I2 414 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-201ENST00000361716 DDX56Q9NY93 547 aaKnown RBP12.97□□□□□ -0.33
VAMP1-201ENST00000361716 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 TMEM216Q9P0N5 145 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 TMEM98Q9Y2Y6 226 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 TMED5Q9Y3A6 229 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 LRCH4O75427 683 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 MAGP20916 626 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 KDELR1P24390 212 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 Q3C1V9 767 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 PTPN20Q4JDL3 420 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 HEATR4Q86WZ0 1026 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 SLC15A4Q8N697 577 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 UBR7Q8N806 425 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 MAPK15Q8TD08 544 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 IRGQQ8WZA9 623 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 FAM149B1Q96BN6 582 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 KLC2Q9H0B6 622 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 SFMBT1Q9UHJ3 866 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF229Q9UJW7 825 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 USP18Q9UMW8 372 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 ATP11BQ9Y2G3 1177 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 FAM32AQ9Y421 112 aaKnown RBP12.97□□□□□ -0.33
VAMP1-201ENST00000361716 TEX264Q9Y6I9 313 aa12.97□□□□□ -0.33
VAMP1-201ENST00000361716 MYO18AQ92614 2054 aaKnown RBP12.96□□□□□ -0.33
VAMP1-201ENST00000361716 WDR27A2RRH5 827 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 AP1G1O43747 822 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 USP12O75317 370 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 ESRRBO95718 433 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 CPA3P15088 417 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 TBXAS1P24557 533 aaPredicted RBP12.96□□□□□ -0.33
VAMP1-201ENST00000361716 ADORA2AP29274 412 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 BMXP51813 675 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
VAMP1-201ENST00000361716 PTP4A2Q12974 167 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 DNASE1L3Q13609 305 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 PRPSAP1Q14558 356 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 EXOC8Q8IYI6 725 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 TRAPPC12Q8WVT3 735 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 APBA2Q99767 749 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 NEURL2Q9BR09 285 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 SIAEQ9HAT2 523 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 YDJCA8MPS7 323 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 MPSTP25325 297 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 CCND2P30279 289 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 HMGCS2P54868 508 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 DUOXA2Q1HG44 320 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF677Q86XU0 584 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 ZC3H7AQ8IWR0 971 aaKnown RBP12.96□□□□□ -0.33
VAMP1-201ENST00000361716 NOL6Q9H6R4 1146 aaKnown RBP12.96□□□□□ -0.33
VAMP1-201ENST00000361716 PNPLA3Q9NST1 481 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 PLK2Q9NYY3 685 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 RIMS3Q9UJD0 308 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 SORCS3Q9UPU3 1222 aa12.96□□□□□ -0.33
VAMP1-201ENST00000361716 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.34
VAMP1-201ENST00000361716 HMGCRP04035 888 aa12.95□□□□□ -0.34
VAMP1-201ENST00000361716 CHRNGP07510 517 aa12.95□□□□□ -0.34
VAMP1-201ENST00000361716 FGF3P11487 239 aaPredicted RBP12.95□□□□□ -0.34
VAMP1-201ENST00000361716 JAK1P23458 1154 aa12.95□□□□□ -0.34
VAMP1-201ENST00000361716 NME5P56597 212 aa12.95□□□□□ -0.34
VAMP1-201ENST00000361716 APOFQ13790 326 aa12.95□□□□□ -0.34
VAMP1-201ENST00000361716 FAM91A1Q658Y4 838 aa12.95□□□□□ -0.34
VAMP1-201ENST00000361716 DLK2Q6UY11 383 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms