RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZNF557Q8N988 423 aaPredicted RBP18.93■□□□□ 0.62
CLIP2-202ENST00000361545 OR52K1Q8NGK4 314 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 SKA1Q96BD8 255 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 PIF1Q9H611 641 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 SNX8Q9Y5X2 465 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 PRKCIP41743 596 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 PARP6Q2NL67 630 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 NKX2-3Q8TAU0 364 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 SHC3Q92529 594 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.93■□□□□ 0.622e-6■■□□□ 12.7
CLIP2-202ENST00000361545 ETNK2Q9NVF9 386 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 TRPC4Q9UBN4 977 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 LRRC10BA6NIK2 292 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 TYMPP19971 482 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 GABRR2P28476 465 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 CYP2C18P33260 490 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 FMO1Q01740 532 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 MMRN1Q13201 1228 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 ANKS6Q68DC2 871 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 TTC7BQ86TV6 843 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 AHCYL2Q96HN2 611 aaKnown RBP18.92■□□□□ 0.62
CLIP2-202ENST00000361545 MAML3Q96JK9 1138 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 EXOC2Q96KP1 924 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 C1QTNF7Q9BXJ2 289 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 YIPF3Q9GZM5 350 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 NINJ2Q9NZG7 142 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 ZMYM5Q9UJ78 669 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 GLUD1P00367 558 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 PANX3Q96QZ0 392 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 CPNE1Q99829 537 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 BBS2Q9BXC9 721 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 SLC28A3Q9HAS3 691 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 HAO1Q9UJM8 370 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 ABCB1P08183 1280 aaPredicted RBP18.92■□□□□ 0.62
CLIP2-202ENST00000361545 OR4Q2P0C623 313 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 P3H2Q8IVL5 708 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 LRRC52Q8N7C0 313 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 TMEM120AQ9BXJ8 343 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 CCDC134Q9H6E4 229 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 CTSEP14091 401 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 CYLC2Q14093 348 aaPredicted RBP18.92■□□□□ 0.62
CLIP2-202ENST00000361545 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.92■□□□□ 0.62
CLIP2-202ENST00000361545 DET1Q7L5Y6 550 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 CXorf40AQ8TE69 158 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 PIK3R5Q8WYR1 880 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 BCL9LQ86UU0 1499 aa18.92■□□□□ 0.62
CLIP2-202ENST00000361545 ABL2P42684 1182 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 RPL7AP62424 266 aaKnown RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 INSCQ1MX18 579 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 FAM9CQ8IZT9 166 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 NMRAL1Q9HBL8 299 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 MID1IP1Q9NPA3 183 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 ZNF112Q9UJU3 913 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 SMIM28A0A1B0GU29 152 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 C16orf96A6NNT2 1141 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 DUSP11O75319 330 aaKnown RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 CYP7B1O75881 506 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 GOT1P17174 413 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 PFKPQ01813 784 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 MAB21L3Q8N8X9 362 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 NETO2Q8NC67 525 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 PTCH2Q9Y6C5 1203 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 COL1A2P08123 1366 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 TM9SF1O15321 606 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 IL1BP01584 269 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 PSMA4P25789 261 aaKnown RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 CRABP2P29373 138 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 AGKQ53H12 422 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 CENPLQ8N0S6 344 aaPredicted RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 PHF21AQ96BD5 680 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 MLPHQ9BV36 600 aaPredicted RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 BPIFA1Q9NP55 256 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 COL20A1Q9P218 1284 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 LYPLA2O95372 231 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 PSTKQ8IV42 348 aaKnown RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 TOP6BLQ8N6T0 577 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 TCP10LQ8TDR4 215 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 EXOSC4Q9NPD3 245 aaKnown RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 CATSPERZQ9NTU4 200 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 LOC102724159A0A0B4J2E5 919 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 UBDO15205 165 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 PHGDHO43175 533 aaKnown RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 CYP1A2P05177 515 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 CCNB1P14635 433 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 SMPD1P17405 629 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 PWP2Q15269 919 aaKnown RBP18.91■□□□□ 0.62
CLIP2-202ENST00000361545 SLC24A5Q71RS6 500 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 VMP1Q96GC9 406 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 L1RE1Q9UN81 338 aa18.91■□□□□ 0.62
CLIP2-202ENST00000361545 A0A0A0MRY4 1105 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 FAM237AA0A1B0GTK4 181 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 ZNF682O95780 498 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 NFKB1P19838 968 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 MRPS5P82675 430 aaKnown RBP18.9■□□□□ 0.62
CLIP2-202ENST00000361545 MTDHQ86UE4 582 aaKnown RBP18.9■□□□□ 0.62
CLIP2-202ENST00000361545 SPATA13Q96N96 652 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 CAAP1Q9H8G2 361 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 C3P01024 1663 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 SLCO1B7G3V0H7 640 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms