RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SYTL1Q8IYJ3 562 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 TDRD5Q8NAT2 981 aaKnown RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 OTULINQ96BN8 352 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 CAPNS2Q96L46 248 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 PARVBQ9HBI1 364 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 C6orf203Q9P0P8 240 aaPredicted RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 ITGAVP06756 1048 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 ARL2P36404 184 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 CSTF3Q12996 717 aaKnown RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 BMPR2Q13873 1038 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 GALNTL6Q49A17 601 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 N4BP2L1Q5TBK1 243 aaPredicted RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 MLPHQ9BV36 600 aaPredicted RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 MPP6Q9NZW5 540 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 SNTNA6NMZ2 147 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 ZBTB14O43829 449 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 DGKIO75912 1065 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 BMP6P22004 513 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 CDC16Q13042 620 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 XRCC4Q13426 336 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 NR6A1Q15406 480 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 RAP1GAP2Q684P5 730 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 BNC2Q6ZN30 1099 aaPredicted RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 TRIM69Q86WT6 500 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 DNAAF5Q86Y56 855 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 CEP41Q9BYV8 373 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 LRRC19Q9H756 370 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 FAM50BQ9Y247 325 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 RWDD3Q9Y3V2 267 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 GLUD2P49448 558 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 ACTN3Q08043 901 aaPredicted RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 CYP51A1Q16850 503 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 LCLAT1Q6UWP7 414 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 SH3BP5LQ7L8J4 393 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 NKAPQ8N5F7 415 aaKnown RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 LNX1Q8TBB1 728 aaPredicted RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 LPPQ93052 612 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 SERAC1Q96JX3 654 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 ANKZF1Q9H8Y5 726 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 ADAM28Q9UKQ2 775 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 PARP4Q9UKK3 1724 aaKnown RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 SMIM28A0A1B0GU29 152 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 HTR7P34969 479 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 CHI3L1P36222 383 aaPredicted RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 NFYCQ13952 458 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 LYPLAL1Q5VWZ2 237 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 RSPH1Q8WYR4 309 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 RCOR3Q9P2K3 495 aaPredicted RBP13.72□□□□□ -0.21
LDB3-202ENST00000361373 TAGLN3Q9UI15 199 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 MAPRE3Q9UPY8 281 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 EFR3BQ9Y2G0 817 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 SLC45A1Q9Y2W3 748 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 IFT172Q9UG01 1749 aa13.72□□□□□ -0.21
LDB3-202ENST00000361373 CA12O43570 354 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 CORO1BQ9BR76 489 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 IGFLR1Q9H665 355 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 CYLDQ9NQC7 956 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 CATSPERZQ9NTU4 200 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 BTBD7Q9P203 1132 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 GLUD1P00367 558 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 IL2P60568 153 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 PRMT9Q6P2P2 845 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 CYP4Z1Q86W10 505 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 ATXN2LQ8WWM7 1075 aaKnown RBP13.71□□□□□ -0.21
LDB3-202ENST00000361373 JADE3Q92613 823 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 NXF3Q9H4D5 531 aaKnown RBP13.71□□□□□ -0.21
LDB3-202ENST00000361373 MIEF1Q9NQG6 463 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 EVA1BQ9NVM1 165 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 LIASO43766 372 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 TLL1O43897 1013 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 FGFR1P11362 822 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 CCNB1P14635 433 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 TCN1P20061 433 aaPredicted RBP13.71□□□□□ -0.21
LDB3-202ENST00000361373 FAM46CQ5VWP2 391 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 ZSWIM2Q8NEG5 633 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 ATL1Q8WXF7 558 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 ELMO3Q96BJ8 720 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 TCF7L2Q9NQB0 619 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 TMCC3Q9ULS5 477 aa13.71□□□□□ -0.21
LDB3-202ENST00000361373 A0A088AWK7 358 aa13.71□□□□□ -0.22
LDB3-202ENST00000361373 TLR5O60602 858 aa13.71□□□□□ -0.22
LDB3-202ENST00000361373 ALBP02768 609 aa13.71□□□□□ -0.22
LDB3-202ENST00000361373 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.22
LDB3-202ENST00000361373 SSTR1P30872 391 aa13.71□□□□□ -0.22
LDB3-202ENST00000361373 SMAD3P84022 425 aaKnown RBP13.71□□□□□ -0.22
LDB3-202ENST00000361373 EVX2Q03828 476 aa13.71□□□□□ -0.22
LDB3-202ENST00000361373 DGKZQ13574 1117 aa13.71□□□□□ -0.22
LDB3-202ENST00000361373 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.71□□□□□ -0.22
LDB3-202ENST00000361373 CLEC4DQ8WXI8 215 aa13.71□□□□□ -0.22
LDB3-202ENST00000361373 AP3M1Q9Y2T2 418 aa13.71□□□□□ -0.22
LDB3-202ENST00000361373 CCNT2O60583 730 aaKnown RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 SNUPNO95149 360 aaKnown RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 FCGR1AP12314 374 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 PSMA3P25788 255 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 PPP2R1BP30154 601 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 SULT2A1Q06520 285 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms