RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SLC5A3P53794 718 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 KRT72Q14CN4 511 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 FAM91A1Q658Y4 838 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 HDAC11Q96DB2 347 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 MTBPQ96DY7 904 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 NSL1Q96IY1 281 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 TMEM120AQ9BXJ8 343 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 CADM1Q9BY67 442 aaKnown RBP23.15■■□□□ 1.3
LDB1-201ENST00000361198 SLC13A1Q9BZW2 595 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 IQCGQ9H095 443 aaKnown RBP23.15■■□□□ 1.3
LDB1-201ENST00000361198 ZBTB24O43167 697 aaPredicted RBP23.14■■□□□ 1.29
LDB1-201ENST00000361198 IGLV3-25P01717 112 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 PGAM1P18669 254 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 SERPINB3P29508 390 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 CCNFP41002 786 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 GARSP41250 739 aaKnown RBP23.14■■□□□ 1.29
LDB1-201ENST00000361198 GALNT2Q10471 571 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 ZBTB17Q13105 803 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 EIF4EBP2Q13542 120 aaPredicted RBP23.14■■□□□ 1.29
LDB1-201ENST00000361198 MAP3K21Q5TCX8 1036 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 TRAF7Q6Q0C0 670 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 C4orf50Q6ZRC1 276 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 SPATA2LQ8IUW3 424 aaPredicted RBP23.14■■□□□ 1.29
LDB1-201ENST00000361198 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.14■■□□□ 1.29
LDB1-201ENST00000361198 MKS1Q9NXB0 559 aa23.14■■□□□ 1.29
LDB1-201ENST00000361198 USP12O75317 370 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 CD68P34810 354 aaPredicted RBP23.13■■□□□ 1.29
LDB1-201ENST00000361198 GRIK1P39086 918 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 CLLU1OSQ5K130 101 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 OR52K1Q8NGK4 314 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 PGLYRP2Q96PD5 576 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 PLLPQ9Y342 182 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 TNFRSF10BO14763 440 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 ENTPD5O75356 428 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 LMNAP02545 664 aaKnown RBP23.13■■□□□ 1.29
LDB1-201ENST00000361198 SRGAP2BP0DMP2 458 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 MX2P20592 715 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 SERPINB6P35237 376 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 SERPINB9P50453 376 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 ZNF135P52742 658 aaPredicted RBP23.13■■□□□ 1.29
LDB1-201ENST00000361198 NIPAL4Q0D2K0 466 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 GLB1LQ6UWU2 654 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 CCNJLQ8IV13 435 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 LINC01599Q8WXQ3 324 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 CELF6Q96J87 481 aaKnown RBP23.13■■□□□ 1.29
LDB1-201ENST00000361198 GLT1D1Q96MS3 346 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 DCLRE1BQ9H816 532 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 PCDHB8Q9UN66 801 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 PATJQ8NI35 1801 aa23.13■■□□□ 1.29
LDB1-201ENST00000361198 CMPK2Q5EBM0 449 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 CES3Q6UWW8 571 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 SLC24A5Q71RS6 500 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 MARK2Q7KZI7 788 aaKnown RBP23.12■■□□□ 1.29
LDB1-201ENST00000361198 BEND5Q7L4P6 421 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.12■■□□□ 1.292e-6■■□□□ 13.2
LDB1-201ENST00000361198 KIRREL3Q8IZU9 778 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 KCNV2Q8TDN2 545 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 NAF1Q96HR8 494 aaKnown RBP23.12■■□□□ 1.29
LDB1-201ENST00000361198 BRD8Q9H0E9 1235 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 SIK2Q9H0K1 926 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 FBXO6Q9NRD1 293 aaPredicted RBP23.12■■□□□ 1.29
LDB1-201ENST00000361198 PCMTD2Q9NV79 361 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 SRRDQ9UH36 339 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 FRMPD3Q5JV73 1810 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 ARHGEF37A1IGU5 675 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 GSC2O15499 205 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 IRAK2O43187 625 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 AP2A1O95782 977 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 NEFHP12036 1026 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 DSC1Q08554 894 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 SMAD1Q15797 465 aaKnown RBP23.12■■□□□ 1.29
LDB1-201ENST00000361198 TTC8Q8TAM2 541 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 OSBPL2Q9H1P3 480 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 ABCC13Q9NSE7 274 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 IL1RAPL1Q9NZN1 696 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 SFMBT1Q9UHJ3 866 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 NEU3Q9UQ49 428 aa23.12■■□□□ 1.29
LDB1-201ENST00000361198 LIN7AO14910 233 aaPredicted RBP23.11■■□□□ 1.29
LDB1-201ENST00000361198 EOMESO95936 686 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 TAF11Q15544 211 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 SLC39A12Q504Y0 691 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 TEX44Q53QW1 395 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 BTBD8Q5XKL5 378 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 RWDD4Q6NW29 188 aaKnown RBP23.11■■□□□ 1.29
LDB1-201ENST00000361198 TRIM42Q8IWZ5 723 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 NDUFAF2Q8N183 169 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 C7orf26Q96N11 449 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 NAT9Q9BTE0 207 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 TRIM62Q9BVG3 475 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 ARHGEF38Q9NXL2 777 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 ZNF189O75820 626 aaPredicted RBP23.11■■□□□ 1.29
LDB1-201ENST00000361198 LUC7L3O95232 432 aaKnown RBP23.11■■□□□ 1.29
LDB1-201ENST00000361198 MYL2P10916 166 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 ZBTB16Q05516 673 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 KCTD11Q693B1 232 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 ARMC2Q8NEN0 867 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 ZSCAN18Q8TBC5 510 aaPredicted RBP23.11■■□□□ 1.29
LDB1-201ENST00000361198 CDKL2Q92772 493 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 DPF3Q92784 378 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 MECRQ9BV79 373 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms