RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 MPOP05164 745 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 FAM200BP0CF97 657 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 VARSP26640 1264 aaKnown RBP6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 SLC5A2P31639 672 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 PEX5P50542 639 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 PPP2CBP62714 309 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 PPP2CAP67775 309 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 TFAMQ00059 246 aaKnown RBP6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 KLRB1Q12918 225 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 SGSM1Q2NKQ1 1148 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 CRB2Q5IJ48 1285 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 SPNS3Q6ZMD2 512 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 SFR1Q86XK3 245 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 FSTL5Q8N475 847 aaPredicted RBP6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 SSC4DQ8WTU2 575 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 SERAC1Q96JX3 654 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 C1QTNF2Q9BXJ5 285 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 KRT82Q9NSB4 513 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 PLD2O14939 933 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 MCF2LO15068 1137 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 JAK2O60674 1132 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 TBCAO75347 108 aaKnown RBP6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 HNRNPA2B1P22626 353 aaKnown RBP6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 POLE2P56282 527 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 DRAP1Q14919 205 aaPredicted RBP6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZNF783Q6ZMS7 281 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 C14orf80Q86SX3 495 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 MAPK15Q8TD08 544 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 KLHDC7BQ96G42 594 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 ATXN7L3BQ96GX2 97 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 CBWD1Q9BRT8 395 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 DNAI2Q9GZS0 605 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 PLA2G4CQ9UP65 541 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 SDK2Q58EX2 2172 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 HEATR9A2RTY3 570 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 H3BM21 787 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 MID1O15344 667 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 CEACAM4O75871 244 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 P4HA1P13674 534 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 TNNC1P63316 161 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 CCDC15Q0P6D6 951 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 KIAA1614Q5VZ46 1190 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 STXBP4Q6ZWJ1 553 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 DSG4Q86SJ6 1040 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 HORMAD1Q86X24 394 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 UNC45BQ8IWX7 931 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 GPR156Q8NFN8 814 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 GOLGA5Q8TBA6 731 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 PRICKLE1Q96MT3 831 aaPredicted RBP6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 KLF6Q99612 283 aaPredicted RBP6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 CEP44Q9C0F1 390 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 LRRC27Q9C0I9 530 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 TNMDQ9H2S6 317 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 KBTBD4Q9NVX7 518 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 KCTD3Q9Y597 815 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 BLACEA4D250 179 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 A8MXQ7 604 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 CLDN5O00501 218 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 XPO1O14980 1071 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 THEGLP0DJG4 465 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 POLR2EP19388 210 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 SLC8A1P32418 973 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 MATR3P43243 847 aaKnown RBP eCLIP6.18□□□□□ -1.423e-6■■■■□ 23.9
CDC42SE2-201ENST00000360515 FNDC3BQ53EP0 1204 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 C1orf220Q5T0J3 134 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 NUGGCQ68CJ6 796 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 TCTN3Q6NUS6 607 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 SPOCK2Q92563 424 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 RAB7BQ96AH8 199 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 BMFQ96LC9 184 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 DKK3Q9UBP4 350 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 MAP4K5Q9Y4K4 846 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 TMEM184BQ9Y519 407 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 ANKRD36A6QL64 1941 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 TSPAN11A1L157 253 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 CASP5P51878 434 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 PITRM1Q5JRX3 1037 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 KDM7AQ6ZMT4 941 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 TIPARPQ7Z3E1 657 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 KRI1Q8N9T8 703 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZPBPQ9BS86 351 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 STRADBQ9C0K7 418 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 TRIT1Q9H3H1 467 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 POLD4Q9HCU8 107 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 CNGB3Q9NQW8 809 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 AGPAT3Q9NRZ7 376 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 UCKL1Q9NWZ5 548 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 CHORDC1Q9UHD1 332 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 KIAA1257Q9ULG3 409 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 STRIP2Q9ULQ0 834 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 NAP1L2Q9ULW6 460 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 DGKBQ9Y6T7 804 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 PDZD2O15018 2839 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 UNC79Q9P2D8 2635 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZNF891A8MT65 544 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 TEAD1P28347 426 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 CLDN6P56747 220 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 YWHAGP61981 247 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 IL9RQ01113 521 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 EIF2B5Q13144 721 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms