RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 NCBP2-AS2Q69YL0 99 aa14.24□□□□□ -0.13
CSNK1E-201ENST00000359867 SCAMP5Q8TAC9 235 aa14.24□□□□□ -0.13
CSNK1E-201ENST00000359867 GDPD5Q8WTR4 605 aa14.24□□□□□ -0.13
CSNK1E-201ENST00000359867 FUBP3Q96I24 572 aaKnown RBP eCLIP14.24□□□□□ -0.137e-7■■■□□ 17.7
CSNK1E-201ENST00000359867 RMDN2Q96LZ7 410 aa14.24□□□□□ -0.13
CSNK1E-201ENST00000359867 GCATO75600 419 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 RTN3O95197 1032 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 OAS1P00973 400 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 RB1P06400 928 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 KRT16P08779 473 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 BRAFP15056 766 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 GOT1P17174 413 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 PHBP35232 272 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 ADRA1BP35368 520 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 MAGEA6P43360 314 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 ZNF135P52742 658 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 PITX1P78337 314 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 SLC10A2Q12908 348 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 RAB30Q15771 203 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 BHLHA9Q7RTU4 235 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 SRRM1Q8IYB3 904 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 ZNF461Q8TAF7 563 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 SLC7A14Q8TBB6 771 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 PYROXD1Q8WU10 500 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 RNF139Q8WU17 664 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 QKIQ96PU8 341 aaKnown RBP eCLIP14.23□□□□□ -0.132e-6■□□□□ 10.6
CSNK1E-201ENST00000359867 OXCT2Q9BYC2 517 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 PRO3102Q9H379 93 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 PIGVQ9NUD9 493 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 FETUBQ9UGM5 382 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 LZTS1Q9Y250 596 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 ACTL7BQ9Y614 415 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 RFXAPO00287 272 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 TMEM63AO94886 807 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 NCAM1P13591 858 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 AMPD1P23109 780 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 HCAR3P49019 387 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 GBE1Q04446 702 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 NR1H3Q13133 447 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 NME3Q13232 169 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 MTA1Q13330 715 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 FASTKD3Q14CZ7 662 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 FNBP1LQ5T0N5 605 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 FAM47EQ6ZV65 393 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 PYROXD2Q8N2H3 581 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 FITM2Q8N6M3 262 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 ATP11CQ8NB49 1132 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 SPPL2BQ8TCT7 592 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 KLHL29Q96CT2 875 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 MAGEB5Q9BZ81 275 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 KLC2Q9H0B6 622 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 CYP4F11Q9HBI6 524 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 WDR6Q9NNW5 1121 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 EURLQ9NYK6 297 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 FBXW11Q9UKB1 542 aa14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-201ENST00000359867 C2orf71A6NGG8 1288 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 H3BNC9 293 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 GOLGA8MH3BSY2 632 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 ABLIM3O94929 683 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 ANP32DO95626 131 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 MLLT1Q03111 559 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 RAB33AQ14088 237 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 ARL13BQ3SXY8 428 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 SPATA21Q7Z572 469 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 MRPL43Q8N983 215 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 EZH1Q92800 747 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 OLFM3Q96PB7 478 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 VPS37BQ9H9H4 285 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 RXFP1Q9HBX9 757 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 BATF3Q9NR55 127 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 ARHGEF4Q9NR80 690 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 DTLQ9NZJ0 730 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 EXOC1LA0A1B0GW35 172 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 TCRBV7S3A2A0A539 114 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 SUN1O94901 812 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 ATF6P18850 670 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 STX2P32856 288 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 SLC5A3P53794 718 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 PAFAH1B3Q15102 231 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 HP1BP3Q5SSJ5 553 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 CGB2Q6NT52 195 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 GIPC2Q8TF65 315 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 TIFAQ96CG3 184 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 KLHL5Q96PQ7 755 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 RAB6BQ9NRW1 208 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 FNIP2Q9P278 1114 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 STK39Q9UEW8 545 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 AFF4Q9UHB7 1163 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 SLC24A2Q9UI40 661 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 RAD54BQ9Y620 910 aa14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 COL4A4P53420 1690 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-201ENST00000359867 PLXNA3P51805 1871 aa14.21□□□□□ -0.13
CSNK1E-201ENST00000359867 A0A1B0GVG6 124 aa14.21□□□□□ -0.13
CSNK1E-201ENST00000359867 EIF4E1BA6NMX2 242 aaKnown RBP14.21□□□□□ -0.13
CSNK1E-201ENST00000359867 TGM5O43548 720 aa14.21□□□□□ -0.13
CSNK1E-201ENST00000359867 HAPLN1P10915 354 aaPredicted RBP14.21□□□□□ -0.13
CSNK1E-201ENST00000359867 USP46P62068 366 aa14.21□□□□□ -0.13
CSNK1E-201ENST00000359867 UBE3AQ05086 875 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms