RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 DTNBP1Q96EV8 351 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PGAP3Q96FM1 320 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 FCRL2Q96LA5 508 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 CWH43Q9H720 699 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 CCSER2Q9H7U1 834 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PREBQ9HCU5 417 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PNPLA8Q9NP80 782 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ABCC13Q9NSE7 274 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 UBP1Q9NZI7 540 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 COL4A6Q14031 1691 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 SPTBN5Q9NRC6 3674 aaKnown RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PDLIM1O00151 329 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 LUC7L3O95232 432 aaKnown RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 COL6A1P12109 1028 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 POLE2P56282 527 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 SCAPQ12770 1279 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 MPP2Q14168 576 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PSMD5Q16401 504 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 TFAP2DQ7Z6R9 452 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 CIR1Q86X95 450 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ZNF567Q8N184 647 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 VPS52Q8N1B4 723 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 DOCK6Q96HP0 2047 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 ARHGEF37A1IGU5 675 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 DFFAO00273 331 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 DNAJC8O75937 253 aaPredicted RBP12.96□□□□□ -0.33
GGPS1-202ENST00000358966 CLTBP09497 229 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 ZFXP17010 805 aaPredicted RBP12.96□□□□□ -0.33
GGPS1-202ENST00000358966 ALDH3A1P30838 453 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 NR2C2P49116 596 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 TUBP50607 506 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 IKBKEQ14164 716 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 PCGF5Q86SE9 256 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 VSIG1Q86XK7 387 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 SLC9A7Q96T83 725 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 KLF6Q99612 283 aaPredicted RBP12.96□□□□□ -0.33
GGPS1-202ENST00000358966 KLC2Q9H0B6 622 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 SMOC2Q9H3U7 446 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 PLAC1Q9HBJ0 212 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 SLC17A6Q9P2U8 582 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 VANGL2Q9ULK5 521 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 GREB1Q4ZG55 1949 aa12.96□□□□□ -0.33
GGPS1-202ENST00000358966 SPAG7O75391 227 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 FAM155BO75949 473 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 EIF4EBP2Q13542 120 aaPredicted RBP12.96□□□□□ -0.34
GGPS1-202ENST00000358966 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.34
GGPS1-202ENST00000358966 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.34
GGPS1-202ENST00000358966 PIK3R6Q5UE93 754 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 RELL1Q8IUW5 271 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 PALM2Q8IXS6 379 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 C4orf33Q8N1A6 199 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 TTC16Q8NEE8 873 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 MYEOVQ96EZ4 313 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 APOL2Q9BQE5 337 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 MAD1L1Q9Y6D9 718 aa12.96□□□□□ -0.34
GGPS1-202ENST00000358966 A0A0A0MRY4 1105 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 ZNF487B1APH4 448 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 SPATA31D3P0C874 917 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 GPR17Q13304 367 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 PAFAH1B3Q15102 231 aaKnown RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 LACTB2Q53H82 288 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 ARTNQ5T4W7 220 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 SPATA31D4Q6ZUB0 917 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 FUBP3Q96I24 572 aaKnown RBP eCLIP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 SPATA13Q96N96 652 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 MRPL9Q9BYD2 267 aaKnown RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 C12orf65Q9H3J6 166 aaKnown RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 RCOR3Q9P2K3 495 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 HS3ST4Q9Y661 456 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 A0A1W2PPM1 405 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 TCRBV9S1A1TA0A576 114 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 E7ESA3 106 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 GOLGA8RI6L899 631 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 CHADO15335 359 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 TBC1D4O60343 1298 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 UGT1A9O60656 530 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 GCATO75600 419 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 SEC24AO95486 1093 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 F9P00740 461 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 YWHAQP27348 245 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 CCR1P32246 355 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 LBX1P52954 281 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 SESN2P58004 480 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 TNFAIP8L3Q5GJ75 292 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 C10orf120Q5SQS8 335 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 TRMT10BQ6PF06 316 aaKnown RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 CES3Q6UWW8 571 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 PID1Q7Z2X4 250 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 PSTKQ8IV42 348 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms