RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 C10orf107Q8IVU9 208 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 LRRC52Q8N7C0 313 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 EFHBQ8N7U6 833 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 MPP4Q96JB8 637 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 CCDC138Q96M89 665 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 KCTD15Q96SI1 283 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 PHACTR1Q9C0D0 580 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 XYLT2Q9H1B5 865 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 EML4Q9HC35 981 aaKnown RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 PNPOQ9NVS9 261 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 TPST1O60507 370 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 THRAP10827 490 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 CCDC15Q0P6D6 951 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 SPANXN3Q5MJ09 141 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF470Q6ECI4 717 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 GLB1LQ6UWU2 654 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 PTAR1Q7Z6K3 402 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 UNC5BQ8IZJ1 945 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 URGCPQ8TCY9 931 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 C10orf82Q8WW14 230 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 RPRD1AQ96P16 312 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF395Q9H8N7 513 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 NT5MQ9NPB1 228 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 NRCAMQ92823 1304 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 CXorf49A8MYA2 514 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 NCAM2O15394 837 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 APOA4P06727 396 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 BPGMP07738 259 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 GEMP55040 296 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 PDAP1Q13442 181 aaKnown RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 NANOGNBQ7Z5D8 188 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 SNX32Q86XE0 403 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 LENG1Q96BZ8 264 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 DTNAQ9Y4J8 743 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 E5RI56 91 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 PIGNO95427 931 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 TSTA3Q13630 321 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 C10orf120Q5SQS8 335 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 IQSEC1Q6DN90 963 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 RIPOR1Q6ZS17 1223 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 SPATA6LQ8N4H0 392 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-201ENST00000358894 CYTH4Q9UIA0 394 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 TYW5A2RUC4 315 aaKnown RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 ATG7O95352 703 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 EDN1P05305 212 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 MRPS5P82675 430 aaKnown RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 TAS2R42Q7RTR8 314 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 GPR142Q7Z601 462 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 IGDCC3Q8IVU1 814 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 NUP93Q8N1F7 819 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 MPP5Q8N3R9 675 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 DCAKDQ8WVC6 231 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 PGLYRP2Q96PD5 576 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 PEBP4Q96S96 227 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 PDLIM7Q9NR12 457 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 BCLAF3A2AJT9 711 aaKnown RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 GNGT2O14610 69 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 FESP07332 822 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 NDUFV1P49821 464 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 ABCE1P61221 599 aaKnown RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 EFEMP1Q12805 493 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 MAPRE2Q15555 327 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 CCDC153Q494R4 210 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 KHDC1Q4VXA5 237 aaKnown RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 SPDYAQ5MJ70 313 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 CERCAMQ5T4B2 595 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 OVOS1Q6IE37 1185 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 IRGCQ6NXR0 463 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 RFWD3Q6PCD5 774 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 BNC2Q6ZN30 1099 aaPredicted RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 FRA10AC1Q70Z53 315 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 RBM15BQ8NDT2 890 aaKnown RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 CALML6Q8TD86 181 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 WDR60Q8WVS4 1066 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 GFM2Q969S9 779 aaKnown RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 SDCCAG3Q96C92 435 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 TSPAN17Q96FV3 270 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 MARK4Q96L34 752 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 CNBD2Q96M20 576 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 GPAMQ9HCL2 828 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 FZD9O00144 591 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 KDM1AO60341 852 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 TOMM70O94826 608 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 F7P08709 466 aaPredicted RBP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 RAB27AP51159 221 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 RAB6CQ53S08 254 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 TMEM63BQ5T3F8 832 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 SLC26A9Q7LBE3 791 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 MAB21L3Q8N8X9 362 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL20A1-201ENST00000358894 RAB6CQ9H0N0 254 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 PALMDQ9NP74 551 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms