RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 PCDHA11Q9Y5I1 949 aa16.4■□□□□ 0.22
PTPN5-201ENST00000358540 HMX2A2RU54 273 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 T-ENOLP0DO92 83 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 GMPRP36959 345 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 SERPINB4P48594 390 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 DSC3Q14574 896 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 SNX30Q5VWJ9 437 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 RWDD4Q6NW29 188 aaKnown RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 OR52K1Q8NGK4 314 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 RFWD2Q8NHY2 731 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 USP33Q8TEY7 942 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 GRAMD1AQ96CP6 724 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 SSU72Q9NP77 194 aaKnown RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 STOML1Q9UBI4 398 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 PRG3Q9Y2Y8 225 aaPredicted RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 TTC3P53804 2025 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 NUP205Q92621 2012 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 CCDC78A2IDD5 438 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 TM9SF1O15321 606 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 LRIG2O94898 1065 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 FDFT1P37268 417 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 TM4SF4P48230 202 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 PAFAH1B3Q15102 231 aaKnown RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 WASHC2DQ5SRD0 308 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 TRIM74Q86UV6 250 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 TRIM73Q86UV7 250 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 PSTKQ8IV42 348 aaKnown RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 SCG3Q8WXD2 468 aaKnown RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 OXNAD1Q96HP4 312 aaPredicted RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 SFMBT1Q9UHJ3 866 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 OPHN1O60890 802 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 SKIP12755 728 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 PTPN3P26045 913 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 VHLP40337 213 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 ZBTB17Q13105 803 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 TUSC3Q13454 348 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 PLEKHG4Q58EX7 1191 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 CMPK2Q5EBM0 449 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 RFWD3Q6PCD5 774 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 SCN4BQ8IWT1 228 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 DQX1Q8TE96 717 aaKnown RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 ALKBH8Q96BT7 664 aaKnown RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 GBP5Q96PP8 586 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 DMAP1Q9NPF5 467 aaPredicted RBP16.39■□□□□ 0.21
PTPN5-201ENST00000358540 LRCH1Q9Y2L9 728 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 PSAT1Q9Y617 370 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 USH1CQ9Y6N9 552 aa16.39■□□□□ 0.21
PTPN5-201ENST00000358540 ZNF623O75123 536 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 RFPL1O75677 317 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 ETV4P43268 484 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 GLUD2P49448 558 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 RASSF2P50749 326 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 SLC18A2Q05940 514 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 SEMA3BQ13214 749 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 RASIP1Q5U651 963 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 CCSAPQ6IQ19 270 aaPredicted RBP16.38■□□□□ 0.21
PTPN5-201ENST00000358540 C4orf22Q6V702 233 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 RGS9BPQ6ZS82 235 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 INPP5DQ92835 1189 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 LRRC39Q96DD0 335 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 DDX50Q9BQ39 737 aaKnown RBP16.38■□□□□ 0.21
PTPN5-201ENST00000358540 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 A0A0G2JND7 137 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 FAM159BA6NKW6 160 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 ZBTB24O43167 697 aaPredicted RBP16.38■□□□□ 0.21
PTPN5-201ENST00000358540 RCN1Q15293 331 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 ARL13BQ3SXY8 428 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 FAM171BQ6P995 826 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 NDUFAF2Q8N183 169 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 DTX3LQ8TDB6 740 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 C10orf82Q8WW14 230 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 ARNTL2Q8WYA1 636 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 ATXN7L3BQ96GX2 97 aa16.38■□□□□ 0.21
PTPN5-201ENST00000358540 ZNF395Q9H8N7 513 aaPredicted RBP16.38■□□□□ 0.21
PTPN5-201ENST00000358540 SDR42E2A6NKP2 422 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 TRDMT1O14717 391 aaKnown RBP16.37■□□□□ 0.21
PTPN5-201ENST00000358540 MOCS2O96007 188 aaPredicted RBP16.37■□□□□ 0.21
PTPN5-201ENST00000358540 ERVK-10P10266 1014 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 GRIK1P39086 918 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 ARHGAP36Q6ZRI8 547 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 KLHL23Q8NBE8 558 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 NTAN1Q96AB6 310 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 DDHD2O94830 711 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 FAM163BP0C2L3 166 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 GSTT1P30711 240 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 ABCG1P45844 678 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 DYNC1I2Q13409 638 aaKnown RBP16.37■□□□□ 0.21
PTPN5-201ENST00000358540 RTN4RL1Q86UN2 441 aaPredicted RBP16.37■□□□□ 0.21
PTPN5-201ENST00000358540 IFT43Q96FT9 208 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 CSNK1G1Q9HCP0 422 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 CHCHD3Q9NX63 227 aaKnown RBP16.37■□□□□ 0.21
PTPN5-201ENST00000358540 ABI2Q9NYB9 513 aaPredicted RBP16.37■□□□□ 0.21
PTPN5-201ENST00000358540 NUMBLQ9Y6R0 609 aa16.37■□□□□ 0.21
PTPN5-201ENST00000358540 C9IYK1 514 aa16.36■□□□□ 0.21
PTPN5-201ENST00000358540 GPR15P49685 360 aa16.36■□□□□ 0.21
PTPN5-201ENST00000358540 SLC5A3P53794 718 aa16.36■□□□□ 0.21
PTPN5-201ENST00000358540 TAF1BQ53T94 588 aaPredicted RBP16.36■□□□□ 0.21
PTPN5-201ENST00000358540 LRRC8BQ6P9F7 803 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms