RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ZNF408Q9H9D4 720 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 MID2Q9UJV3 735 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 NFASCO94856 1347 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 CITO14578 2027 aa6.71□□□□□ -1.33
CSDE1-203ENST00000358528 CAPN14A8MX76 684 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 HUS1O60921 280 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 TNFAIP8O95379 198 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 LTFP02788 710 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ALDOAP04075 364 aaKnown RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PTPN7P35236 360 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 SLC10A2Q12908 348 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CTBP1Q13363 440 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PCLAFQ15004 111 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 NADK2Q4G0N4 442 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 MBLAC2Q68D91 279 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 GK5Q6ZS86 529 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF276Q8N554 614 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 BEST2Q8NFU1 509 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 EDEM1Q92611 657 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 MCRS1Q96EZ8 462 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 KCTD15Q96SI1 283 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 GATA5Q9BWX5 397 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ACE2Q9BYF1 805 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CDH19Q9H159 772 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 DPEP3Q9H4B8 488 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 SMARCAD1Q9H4L7 1026 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 TRPC7Q9HCX4 862 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 DTLQ9NZJ0 730 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ITGA11Q9UKX5 1188 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 STAP1Q9ULZ2 295 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 BCLAF3A2AJT9 711 aaKnown RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 SPDYE16A6NNV3 312 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 C9JVG2 144 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 KLF11O14901 512 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 STBD1O95210 358 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 VAPBO95292 243 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 NCAM1P13591 858 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 RGS2P41220 211 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ADARP55265 1226 aaKnown RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PLIN5Q00G26 463 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CSHL1Q14406 222 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 C16orf72Q14CZ0 275 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PITRM1Q5JRX3 1037 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CES4AQ5XG92 561 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 SLC41A1Q8IVJ1 513 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 RNF139Q8WU17 664 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PDCD6IPQ8WUM4 868 aaKnown RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 C18orf25Q96B23 403 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 DGCR14Q96DF8 476 aaKnown RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 THAP11Q96EK4 314 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 FSD1LQ9BXM9 530 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PDGFDQ9GZP0 370 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PCDHAC1Q9H158 963 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 OCEL1Q9H607 264 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PDLIM7Q9NR12 457 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CHRAC1Q9NRG0 131 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PSMD13Q9UNM6 376 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 STYXL1Q9Y6J8 313 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 BTAF1O14981 1849 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 TMEM233B4DJY2 109 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CLDN5O00501 218 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PPEF2O14830 753 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ZBTB14O43829 449 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 B4GALT4O60513 344 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 AOC1P19801 751 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PRKCHP24723 683 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 RPL14P50914 215 aaKnown RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CACNB2Q08289 660 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 GK3PQ14409 553 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 LSM12Q3MHD2 195 aaKnown RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ARL13AQ5H913 290 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 FSTL4Q6MZW2 842 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ZBTB49Q6ZSB9 765 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CLVS1Q8IUQ0 354 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 TP53INP2Q8IXH6 220 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 DDIASQ8IXT1 998 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ATP6V1E2Q96A05 226 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 LENG1Q96BZ8 264 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CIB1Q99828 191 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 HAUS8Q9BT25 410 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ELP3Q9H9T3 547 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CYP3A43Q9HB55 503 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 PDGFCQ9NRA1 345 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 DDIT4Q9NX09 232 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 CNTN3Q9P232 1028 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 ATXN10Q9UBB4 475 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 SORCS3Q9UPU3 1222 aa6.71□□□□□ -1.34
CSDE1-203ENST00000358528 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-203ENST00000358528 COL16A1Q07092 1604 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 XIRP1Q702N8 1843 aaKnown RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 RGSL1A5PLK6 1076 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 KLHL33A6NCF5 533 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 FAM159BA6NKW6 160 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF839A8K0R7 811 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 HBP1O60381 514 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TMCC1O94876 653 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ZBTB7AO95365 584 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CRTAMO95727 393 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ARF4P18085 180 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CLDN10P78369 228 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms