RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 BCAP31P51572 246 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 COPZ1P61923 177 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 UXS1Q8NBZ7 420 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ZSWIM2Q8NEG5 633 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 EBF2Q9HAK2 575 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SIK3Q9Y2K2 1263 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PRR36Q9H6K5 1346 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 APOC4-APOC2K7ER74 178 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TRIM38O00635 465 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 CD4P01730 458 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 APOC2P02655 101 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SNRPB2P08579 225 aaKnown RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TSHRP16473 764 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 CSHL1Q14406 222 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 Q96MT0 163 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SLC4A5Q9BY07 1137 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 KLHL1Q9NR64 748 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 CDH22Q9UJ99 828 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 FARP1Q9Y4F1 1045 aaPredicted RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 H3BN98 237 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 POLRMTO00411 1230 aaKnown RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 CAPGP40121 348 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ENPEPQ07075 957 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 GALNT18Q6P9A2 607 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 HOXC10Q9NYD6 342 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SALL3Q9BXA9 1300 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 CCNE2O96020 404 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 GEMP55040 296 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 RUNDC3AQ59EK9 446 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 IZUMO1Q8IYV9 350 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PIGBQ92521 554 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TEKT5Q96M29 485 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PIGUQ9H490 435 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 MID1IP1Q9NPA3 183 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 BAIAP2Q9UQB8 552 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 FAM208AQ9UK61 1670 aaKnown RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 MAGEC1O60732 1142 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 KCNH1O95259 989 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 NADKO95544 446 aaPredicted RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 CYP2F1P24903 491 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PSME3P61289 254 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PRKCEQ02156 737 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 BST1Q10588 318 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 C2CD6Q53TS8 623 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 RAB43Q86YS6 212 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF540Q8NDQ6 660 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 GPRASP2Q96D09 838 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PHF21BQ96EK2 531 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TSEN34Q9BSV6 310 aaKnown RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ACSS3Q9H6R3 686 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 CAPN8A6NHC0 703 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 MAP3K6O95382 1288 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ZBTB11O95625 1053 aaPredicted RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PRKCIP41743 596 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 MAPKAPK2P49137 400 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 SUPT20HL1Q3ZLR7 823 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 C6orf52Q5T4I8 152 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PLA2G4FQ68DD2 849 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TMC7Q7Z402 723 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 ZBTB8BQ8NAP8 495 aaPredicted RBP8.92□□□□□ -0.98
COL6A6-201ENST00000358511 BAP1Q92560 729 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 PCDHGA3Q9Y5H0 932 aa8.92□□□□□ -0.98
COL6A6-201ENST00000358511 TFECO14948 347 aaPredicted RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 CYP2C9P11712 490 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ITGAXP20702 1163 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 HNRNPH3P31942 346 aaKnown RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 CD151P48509 253 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 TRIM32Q13049 653 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 USP39Q53GS9 565 aaKnown RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 TRABD2AQ86V40 505 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 SH2D3AQ9BRG2 576 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 OSBPL7Q9BZF2 842 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ADPRHL2Q9NX46 363 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 MTF2Q9Y483 593 aaPredicted RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 KLHL33A6NCF5 533 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 MGAT4DA6NG13 374 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 SNAP23O00161 211 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PPP2R1BP30154 601 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 SRP54P61011 504 aaKnown RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ARHGEF6Q15052 776 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF544Q6NX49 715 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ARHGAP36Q6ZRI8 547 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 RAB2BQ8WUD1 216 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 FAM172AQ8WUF8 416 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 GPR63Q9BZJ6 419 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 RAVER2Q9HCJ3 691 aaKnown RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PRDM5Q9NQX1 630 aaPredicted RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PDGFCQ9NRA1 345 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 SYNPO2Q9UMS6 1093 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 AP4E1Q9UPM8 1137 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PLOD3O60568 738 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PLA2G6O60733 806 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 RTP1P59025 263 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 VPS72Q15906 364 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF720Q7Z2F6 126 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 LDHDQ86WU2 507 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ABRAQ8N0Z2 381 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PNPT1Q8TCS8 783 aaKnown RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 BLOC1S5Q8TDH9 187 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms