RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 ICAM3P32942 547 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 GRIA4P48058 902 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 PLOD1Q02809 727 aaPredicted RBP6.98□□□□□ -1.29
RTN4-203ENST00000357376 FOLH1Q04609 750 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 R3HDM1Q15032 1099 aaKnown RBP6.98□□□□□ -1.29
RTN4-203ENST00000357376 FAM83EQ2M2I3 478 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 SPANXN3Q5MJ09 141 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 BTBD8Q5XKL5 378 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 ILDR2Q71H61 639 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 SETD3Q86TU7 594 aaPredicted RBP6.98□□□□□ -1.29
RTN4-203ENST00000357376 SLC41A1Q8IVJ1 513 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 ANKLE1Q8NAG6 615 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 SNRNP27Q8WVK2 155 aaKnown RBP6.98□□□□□ -1.29
RTN4-203ENST00000357376 LENG8Q96PV6 779 aaPredicted RBP6.98□□□□□ -1.29
RTN4-203ENST00000357376 TRAPPC9Q96Q05 1148 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 AGAP2Q99490 1192 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 ULBP1Q9BZM6 244 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 WDR41Q9HAD4 459 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 SARS2Q9NP81 518 aaKnown RBP6.98□□□□□ -1.29
RTN4-203ENST00000357376 NUDT5Q9UKK9 219 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 SORCS3Q9UPU3 1222 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 PSAT1Q9Y617 370 aa6.98□□□□□ -1.29
RTN4-203ENST00000357376 E7ESA3 106 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 TK2O00142 265 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 RFPL1O75677 317 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 USP17L7P0C7H9 530 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PSMC3P17980 439 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 TSPAN8P19075 237 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 IDH3AP50213 366 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 CLDN10P78369 228 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 KLF10Q13118 480 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 CTBP1Q13363 440 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ZNF470Q6ECI4 717 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 SLC27A1Q6PCB7 646 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PLPPR4Q7Z2D5 763 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ZDHHC17Q8IUH5 632 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PQLC3Q8N755 202 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 MTMR14Q8NCE2 650 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 FAM156AQ8NDB6 213 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 B4GALNT2Q8NHY0 566 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ACMSDQ8TDX5 336 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 CYGBQ8WWM9 190 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 MOCOSQ96EN8 888 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 TEPSINQ96N21 525 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 NR1H4Q96RI1 486 aaPredicted RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 HAUS8Q9BT25 410 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 FAM192AQ9GZU8 254 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 TRPC7Q9HCX4 862 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 MORF4L1Q9UBU8 362 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 BTAF1O14981 1849 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ABLIM1O14639 778 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 SRP72O76094 671 aaKnown RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 DDHD2O94830 711 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 HMBSP08397 361 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 HNRNPLP14866 589 aaKnown RBP eCLIP6.97□□□□□ -1.295e-9■■■□□ 16.4
RTN4-203ENST00000357376 TPSB2P20231 275 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ME2P23368 584 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ADORA2AP29274 412 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ETFBP38117 255 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 RPL14P50914 215 aaKnown RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 CHN2P52757 468 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PRKAA1Q13131 559 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 MAPRE2Q15555 327 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 TPSAB1Q15661 275 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 FASTKD5Q7L8L6 764 aaKnown RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 PSTKQ8IV42 348 aaKnown RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 ANKRD52Q8NB46 1076 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PDCD6IPQ8WUM4 868 aaKnown RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 DNAJB3Q8WWF6 145 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PBXIP1Q96AQ6 731 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 SIKE1Q9BRV8 207 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 FZD8Q9H461 694 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PTPRHQ9HD43 1115 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ARHGEF4Q9NR80 690 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 CHRAC1Q9NRG0 131 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 DDX43Q9NXZ2 648 aaKnown RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 NCKIPSDQ9NZQ3 722 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 POMPQ9Y244 141 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 AHDC1Q5TGY3 1603 aaPredicted RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 C15orf38-AP3S2A0A0A6YYH1 394 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ARHGEF37A1IGU5 675 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PABPN1LA6NDY0 278 aaKnown RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 HACD1B0YJ81 288 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 ANGPT2O15123 496 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 DDNO94850 711 aaPredicted RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 STBD1O95210 358 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 AMHP03971 560 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 APOA4P06727 396 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 UQCRBP14927 111 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 YBX3P16989 372 aaKnown RBP eCLIP6.97□□□□□ -1.292e-23■□□□□ 9.5
RTN4-203ENST00000357376 VCLP18206 1134 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 LMO2P25791 158 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 PIK3R1P27986 724 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 CDK7P50613 346 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 MRPS5P82675 430 aaKnown RBP6.97□□□□□ -1.29
RTN4-203ENST00000357376 CDH17Q12864 832 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 TAF12Q16514 161 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 SOWAHAQ2M3V2 549 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 LIN52Q52LA3 116 aa6.97□□□□□ -1.29
RTN4-203ENST00000357376 CWF19L1Q69YN2 538 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms