RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CCDC106Q9BWC9 280 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 B3GNT5Q9BYG0 378 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 LHX5Q9H2C1 402 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 PCMTD2Q9NV79 361 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 SIRPGQ9P1W8 387 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 TAGLN3Q9UI15 199 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 XPO7Q9UIA9 1087 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 ZNF180Q9UJW8 692 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 KIAA1671Q9BY89 1806 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.336e-6■■■■■ 90.4
RTFDC1-202ENST00000357348 TCRBV9S1A1TA0A576 114 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 TMEM189-UBE2V1I3L0A0 370 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 BUD23O43709 281 aaKnown RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 EFCAB14O75071 495 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 GRAP2O75791 330 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 PIAS1O75925 651 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 LCP1P13796 627 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 RPL17P18621 184 aaKnown RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 BDNFP23560 247 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 PCSK1P29120 753 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 DSG1Q02413 1049 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 SLC39A12Q504Y0 691 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 TEX44Q53QW1 395 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 RIPOR1Q6ZS17 1223 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 MYLPFQ96A32 169 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 TTC17Q96AE7 1141 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 PIWIL1Q96J94 861 aaKnown RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 FAM161BQ96MY7 647 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 GBP5Q96PP8 586 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 FAM124BQ9H5Z6 455 aaPredicted RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 RC3H2Q9HBD1 1191 aaKnown RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 TMEM30AQ9NV96 361 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 DSEQ9UL01 958 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 CDH9Q9ULB4 789 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 SEC23IPQ9Y6Y8 1000 aaKnown RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 TNRC18O15417 2968 aaPredicted RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 LCHNA4D1U4 455 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 C2orf71A6NGG8 1288 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 FKBP6O75344 327 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 GJB5O95377 273 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 PYGBP11216 843 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 STIP1P31948 543 aaKnown RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 POLE2P56282 527 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 AP2B1P63010 937 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 CUL3Q13618 768 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 CTXN3Q4LDR2 81 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 INTS6LQ5JSJ4 861 aaKnown RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 ARHGAP17Q68EM7 881 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 ULK2Q8IYT8 1036 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 ARFGAP1Q8N6T3 406 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 ANKRD52Q8NB46 1076 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 STKLD1Q8NE28 680 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 FNIP1Q8TF40 1166 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 NDRG1Q92597 394 aaKnown RBP13□□□□□ -0.33
RTFDC1-202ENST00000357348 PPP2R3CQ969Q6 453 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 HAPLN3Q96S86 360 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 ACBD6Q9BR61 282 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 TMEM175Q9BSA9 504 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 ARMCX1Q9P291 453 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 SLC7A8Q9UHI5 535 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 PLLPQ9Y342 182 aa13□□□□□ -0.33
RTFDC1-202ENST00000357348 GRXCR1A8MXD5 290 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 SPECC1L-ADORA2AF8WAN1 911 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 CST8O60676 142 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 KRT7P08729 469 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 KDELR1P24390 212 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 DNAJB2P25686 324 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 CA8P35219 290 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 ELK3P41970 407 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 BST2Q10589 180 aaKnown RBP12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 DPYSL3Q14195 570 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 TAF5Q15542 800 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 KBTBD12Q3ZCT8 623 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 PKDCCQ504Y2 493 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 C9orf50Q5SZB4 431 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 TTC39BQ5VTQ0 682 aaPredicted RBP12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 OR6B2Q6IFH4 312 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 PSRC1Q6PGN9 363 aaPredicted RBP12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 RSPO2Q6UXX9 243 aaPredicted RBP12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 CDHR3Q6ZTQ4 885 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 FAM35AQ86V20 835 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 SLC26A11Q86WA9 606 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 EMC1Q8N766 993 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 DRAXINQ8NBI3 349 aaPredicted RBP12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 FBXO27Q8NI29 283 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 CLEC4CQ8WTT0 213 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 SLC35F5Q8WV83 523 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 RSAD2Q8WXG1 361 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 IGSF21Q96ID5 467 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 SRPK1Q96SB4 655 aaKnown RBP12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 SPATA16Q9BXB7 569 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 VN1R3Q9BXE9 311 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 WWP1Q9H0M0 922 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 SORCS3Q9UPU3 1222 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 NLRC5Q86WI3 1866 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 MYO7AQ13402 2215 aa12.99□□□□□ -0.33
RTFDC1-202ENST00000357348 H3BRJ5 948 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms