RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PAPSS1O43252 624 aaPredicted RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ITGA10O75578 1167 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 DGKIO75912 1065 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PABPC1P11940 636 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ACTR2P61160 394 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 RPS6P62753 249 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 POU5F1Q01860 360 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ARHGEF6Q15052 776 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PCBP1Q15365 356 aaKnown RBP eCLIP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 RBM48Q5RL73 367 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 DHRS4L2Q6PKH6 230 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PIK3C3Q8NEB9 887 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 OR2T34Q8NGX1 318 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 OR2T3Q8NH03 318 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CDH19Q9H159 772 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 UNC93B1Q9H1C4 597 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 IFT80Q9P2H3 777 aaPredicted RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 K7EPI3 171 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 NPR3P17342 541 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 HIRAP54198 1017 aaPredicted RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 GPR107Q5VW38 600 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 FBXO33Q7Z6M2 555 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CDH24Q86UP0 819 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ACTL9Q8TC94 416 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 BORCS6Q96GS4 357 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SEMA6AQ9H2E6 1030 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SP140LQ9H930 580 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 POLR1BQ9H9Y6 1135 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PSME2Q9UL46 239 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 KCPQ6ZWJ8 1503 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ATRNL1Q5VV63 1379 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PRR5-ARHGAP8B1AHC4 643 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CREB1P16220 341 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ITIH1P19827 911 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ARHGAP8P85298 464 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 GK3PQ14409 553 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ANO4Q32M45 955 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ARMC4Q5T2S8 1044 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 Q6ZNX1 250 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SMYD2Q9NRG4 433 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 TCRBV9S1A1TA0A576 114 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SLC12A3P55017 1021 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 TPTEP56180 551 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 EPC2Q52LR7 807 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 AARS2Q5JTZ9 985 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 DEPDC1Q5TB30 811 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CXorf21Q9HAI6 301 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CCDC59Q9P031 241 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 TLL2Q9Y6L7 1015 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 BCL9O00512 1426 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 IRGMA1A4Y4 181 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PSMD11O00231 422 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CLPPQ16740 277 aaPredicted RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 DCAF12L1Q5VU92 463 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 TSPEARQ8WU66 669 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 RUSC1Q9BVN2 902 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SENP6Q9GZR1 1112 aaPredicted RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 TPK1Q9H3S4 243 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 VTA1Q9NP79 307 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PCDHA11Q9Y5I1 949 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 NPPAP01160 153 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SFT2D3Q587I9 215 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CYS1Q717R9 158 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 DNAJC10Q8IXB1 793 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SLC5A5Q92911 643 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 AGAP3Q96P47 875 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 POP1Q99575 1024 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CHST7Q9NS84 486 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 FAM92AA1XBS5 289 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 USP17L3A6NCW0 530 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 USP17L4A6NCW7 530 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SPDYE16A6NNV3 312 aaPredicted RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CENPXA8MT69 81 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 FOXO6A8MYZ6 492 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 BFSP2Q13515 415 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 C5orf22Q49AR2 442 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 USP17L1Q7RTZ2 530 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 TLK2Q86UE8 772 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 RBM4BQ9BQ04 359 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 RBM4Q9BWF3 364 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 RPRD1BQ9NQG5 326 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 GMIPQ9P107 970 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 SLC17A7Q9P2U7 560 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 BTBD3Q9Y2F9 522 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PCDHB12Q9Y5F1 795 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CRKLP46109 303 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 TUFMP49411 452 aaKnown RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PRKD1Q15139 912 aaPredicted RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 PROSER1Q86XN7 944 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 DNAAF5Q86Y56 855 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 FAM47BQ8NA70 645 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CDRT15Q96T59 188 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 ADI1Q9BV57 179 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 CLEC4MQ9H2X3 399 aaPredicted RBP6.69□□□□□ -1.34
TRIM38-201ENST00000357085 GTSE1Q9NYZ3 720 aa6.69□□□□□ -1.34
TRIM38-201ENST00000357085 TRIP11Q15643 1979 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ILVBLA1L0T0 632 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 FAM47E-STBD1D6RA91 191 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SNPHO15079 494 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms