RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TRPM5Q9NZQ8 1165 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 RPS6KB2Q9UBS0 482 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 UBA2Q9UBT2 640 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 CORO1CQ9ULV4 474 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 CBX4O00257 560 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 RAMP2O60895 175 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 MYL12AP19105 171 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CYP2A7P20853 494 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 MAPK10P53779 464 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 PGM5Q15124 567 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 SHROOM1Q2M3G4 852 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 AADACL2Q6P093 401 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 PALB2Q86YC2 1186 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 ZNF276Q8N554 614 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 ZNF614Q8N883 585 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 LPCAT1Q8NF37 534 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 SYT15Q9BQS2 421 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 PTPRHQ9HD43 1115 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CHKBQ9Y259 395 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 FEN1P39748 380 aaKnown RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 CYP2W1Q8TAV3 490 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 TPD52L3Q96J77 140 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 A0A0B4J269 797 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CCL15-CCL14A0A0B4J2E2 113 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 RECQL5O94762 991 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 ENDOD1O94919 500 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CCL15Q16663 113 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 MIIPQ5JXC2 388 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 DDX43Q9NXZ2 648 aaKnown RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 TRIM43BA6NCK2 446 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 TBKBP1A7MCY6 615 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 MYL12BO14950 172 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 RGS14O43566 566 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 LIASO43766 372 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 COX4I1P13073 169 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 LBPP18428 481 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 THPOP40225 353 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 MTA1Q13330 715 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 SLC9A5Q14940 896 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 VPS72Q15906 364 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 ALFQ53S48 1182 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 SDE2Q6IQ49 451 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 KLHL17Q6TDP4 642 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 HACL1Q9UJ83 578 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 GTF2A1LQ9UNN4 478 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 STAU1O95793 577 aaKnown RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 CTXN3Q4LDR2 81 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 TRIM48Q8IWZ4 208 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 SCUBE3Q8IX30 993 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 PGBD3Q8N328 593 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 EDEM1Q92611 657 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 CENPIQ92674 756 aaPredicted RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 SCAF8Q9UPN6 1271 aaKnown RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 GAKO14976 1311 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 TTC7BQ86TV6 843 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 PRELID2Q8N945 189 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 FLCNQ8NFG4 579 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 DNERQ8NFT8 737 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 UBASH3BQ8TF42 649 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 MRPS31Q92665 395 aaKnown RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 MTMR9Q96QG7 549 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 TSEN34Q9BSV6 310 aaKnown RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 STN1Q9H668 368 aaKnown RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 ADAM28Q9UKQ2 775 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 EFCAB10A6NFE3 127 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 UBXN8O00124 270 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 OPLAHO14841 1288 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 S100A3P33764 101 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 DNAJC14Q6Y2X3 702 aaPredicted RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 KCNK18Q7Z418 384 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 DEFB106AQ8N104 65 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 NUAK2Q9H093 628 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 ZFYVE28Q9HCC9 887 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 ENTPD7Q9NQZ7 604 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 POLLQ9UGP5 575 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 INVSQ9Y283 1065 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 FGFR3P22607 806 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 PLK1P53350 603 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 ZCCHC8Q6NZY4 707 aaKnown RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 NT5DC4Q86YG4 428 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 ALLCQ8N6M5 410 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 MAGEE2Q8TD90 523 aaPredicted RBP15.1■□□□□ 0.01
CHD4-201ENST00000357008 STARD8Q92502 1023 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 KLHL31Q9H511 634 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 MROH8Q9H579 483 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 TAS2R14Q9NYV8 317 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 BTBD3Q9Y2F9 522 aa15.1■□□□□ 0.01
CHD4-201ENST00000357008 H3BN98 237 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 TGFB3P10600 412 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 VCLP18206 1134 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 GSSP48637 474 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 PIK3CGP48736 1102 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 TGM3Q08188 693 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 NDUFA5Q16718 116 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 BROXQ5VW32 411 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 IL22Q9GZX6 179 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 PLGRKTQ9HBL7 147 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 KCNQ5Q9NR82 932 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 CDH9Q9ULB4 789 aa15.09■□□□□ 0.01
CHD4-201ENST00000357008 RGSL1A5PLK6 1076 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms