RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ATP6V0D2Q8N8Y2 350 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 TEKT4Q8WW24 435 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 MYO19Q96H55 970 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 OSBPL9Q96SU4 736 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 CDK5RAP1Q96SZ6 601 aaKnown RBP4.14□□□□□ -1.75
LIG4-201ENST00000356922 AP1M1Q9BXS5 423 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 TSGA10Q9BZW7 698 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 CA14Q9ULX7 337 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 SNX12Q9UMY4 172 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 JRKLQ9Y4A0 524 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 ZNF292O60281 2723 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 EEF2KO00418 725 aaKnown RBP4.14□□□□□ -1.75
LIG4-201ENST00000356922 STK25O00506 426 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 HNRNPLP14866 589 aaKnown RBP eCLIP4.14□□□□□ -1.75
LIG4-201ENST00000356922 PFKLP17858 780 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 OR1E1P30953 314 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 KCNJ1P48048 391 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 TDGQ13569 410 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 RPS6KA1Q15418 735 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 FUT11Q495W5 492 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 DGKKQ5KSL6 1271 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 SND1Q7KZF4 910 aaKnown RBP eCLIP4.14□□□□□ -1.75
LIG4-201ENST00000356922 TADA2BQ86TJ2 420 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 CPXM2Q8N436 756 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 CYB5D2Q8WUJ1 264 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 C1orf54Q8WWF1 131 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 ZNF592Q92610 1267 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 HMCESQ96FZ2 354 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 CAPZA3Q96KX2 299 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 FEM1AQ9BSK4 669 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 OSBPL8Q9BZF1 889 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 FOXQ1Q9C009 403 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 LRRC19Q9H756 370 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 RRAGDQ9NQL2 400 aaPredicted RBP4.14□□□□□ -1.75
LIG4-201ENST00000356922 TBC1D30Q9Y2I9 924 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 HEY1Q9Y5J3 304 aa4.14□□□□□ -1.75
LIG4-201ENST00000356922 CCDC66A2RUB6 948 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 F5H5T6 163 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 MUSKO15146 869 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 PSTPIP1O43586 416 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 KIF5CO60282 957 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ZMPSTE24O75844 475 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 KRT7P08729 469 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 SLC2A3P11169 496 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ADH5P11766 374 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ETS1P14921 441 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 CTHP32929 405 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 CSKP41240 450 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 KPNA1P52294 538 aaPredicted RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 GDF10P55107 478 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 RWDD2BP57060 319 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 PON2Q15165 354 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 PTPRRQ15256 657 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 HADHQ16836 314 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 PTPRNQ16849 979 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 SLC44A4Q53GD3 710 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 TFDP3Q5H9I0 405 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 AFMIDQ63HM1 303 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 SLC9A4Q6AI14 798 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 TTC27Q6P3X3 843 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 Q6ZS52 159 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 EXD1Q8NHP7 514 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 TRIM62Q9BVG3 475 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ZYG11BQ9C0D3 744 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 OBP2AQ9NY56 170 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ZFHX2Q9C0A1 2572 aaPredicted RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 SPECC1L-ADORA2AF8WAN1 911 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 CEP104O60308 925 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 CACNG3O60359 315 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 FGGP02679 453 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 CHKAP35790 457 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 PAPOLAP51003 745 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 METAP1P53582 386 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 TPI1P60174 286 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ARF5P84085 180 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 NRG1Q02297 640 aaPredicted RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 KDSRQ06136 332 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 KRT81Q14533 505 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 NUMA1Q14980 2115 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 TRADDQ15628 312 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ARL13BQ3SXY8 428 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 RNF219Q5W0B1 726 aaPredicted RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 FSTL4Q6MZW2 842 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ZC3H18Q86VM9 953 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 CCDC50Q8IVM0 306 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.13□□□□□ -1.75
LIG4-201ENST00000356922 RTL3Q8N8U3 475 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 PRELID2Q8N945 189 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 TMEM248Q9NWD8 314 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 PPARGC1AQ9UBK2 798 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 LSM7Q9UK45 103 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 DNPEPQ9ULA0 475 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 PIAS3Q9Y6X2 628 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 SHROOM3Q8TF72 1996 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 CFAP47Q6ZTR5 3102 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 F5H423 210 aaPredicted RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 H0Y626 953 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 KCNK1O00180 336 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 HOXC11O43248 304 aaPredicted RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 MAFKO60675 156 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms