RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GDAP1L1Q96MZ0 367 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 FMO2Q99518 471 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 SLC39A8Q9C0K1 460 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 TTYH1Q9H313 450 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 SOBPA7XYQ1 873 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 ZNF197O14709 1029 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 PPP1R12AO14974 1030 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 GARSP41250 739 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 RPS24P62847 133 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 CAV1Q03135 178 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 PPIDQ08752 370 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 SYCE2Q6PIF2 218 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 FAM217AQ8IXS0 508 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 UMODL1-AS1Q8N2C9 162 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 LZTR1Q8N653 840 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 CCNYQ8ND76 341 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 TTC16Q8NEE8 873 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 DEPDC1BQ8WUY9 529 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 USP13Q92995 863 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 HDAC11Q96DB2 347 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 APOL5Q9BWW9 433 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 CDH22Q9UJ99 828 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 MRPS23Q9Y3D9 190 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 ZFP37Q9Y6Q3 630 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 TRIOBPQ9H2D6 2365 aa18.63■□□□□ 0.57
SMARCD3-202ENST00000356800 MYO18AQ92614 2054 aaKnown RBP18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 NCAM2O15394 837 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 TSPAN3O60637 253 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 PRAMEF12O95522 483 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 AVPR1AP37288 418 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 HSPA9P38646 679 aaKnown RBP18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 AP1B1Q10567 949 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 GPS1Q13098 491 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 CBX2Q14781 532 aaPredicted RBP18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 ARHGAP36Q6ZRI8 547 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 SH3RF2Q8TEC5 729 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 HTR3CQ8WXA8 447 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 P2RY11Q96G91 374 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 ADAM7Q9H2U9 754 aa18.62■□□□□ 0.57
SMARCD3-202ENST00000356800 SZT2Q5T011 3432 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 DFFAO00273 331 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 NDC80O14777 642 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 MX2P20592 715 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 P3H1Q32P28 736 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 HEATR6Q6AI08 1181 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 ANKRD54Q6NXT1 300 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 RHBDF2Q6PJF5 856 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 BBS7Q8IWZ6 715 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 LRRC45Q96CN5 670 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 DDX50Q9BQ39 737 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 TDP1Q9NUW8 608 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 MTRF1LQ9UGC7 380 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 LSM7Q9UK45 103 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 COLQQ9Y215 455 aaPredicted RBP18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 SH3BP1Q9Y3L3 701 aa18.61■□□□□ 0.57
SMARCD3-202ENST00000356800 NDST2P52849 883 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 WASHC5Q12768 1159 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 ADAM15Q13444 863 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 RABGAP1LQ5R372 815 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 GPR149Q86SP6 731 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 CCDC110Q8TBZ0 833 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 BRD8Q9H0E9 1235 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 MYOFQ9NZM1 2061 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 A0A1W2PPC1 479 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 C5orf60A6NFR6 353 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 GCATO75600 419 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 MAPKAPK2P49137 400 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 PAPOLAP51003 745 aaKnown RBP18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 ITGA8P53708 1063 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 GRIN2CQ14957 1233 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 IZUMO3Q5VZ72 239 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 HIBCHQ6NVY1 386 aaPredicted RBP18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 TMC3Q7Z5M5 1100 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 TAB3Q8N5C8 712 aaPredicted RBP18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 OR52K2Q8NGK3 314 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 TSGA13Q96PP4 275 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 TXLNGYQ9BZA5 131 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 TSPYL1Q9H0U9 437 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 LMCD1Q9NZU5 365 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 ZMYM5Q9UJ78 669 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 HPCAL4Q9UM19 191 aa18.6■□□□□ 0.57
SMARCD3-202ENST00000356800 E2F8A0AVK6 867 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 KCNK1O00180 336 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 RNF103O00237 685 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 DNALI1O14645 258 aaPredicted RBP18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 MAFKO60675 156 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 PPFIA2O75334 1257 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 ZNF189O75820 626 aaPredicted RBP18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 OR1E1P30953 314 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 CDH4P55283 916 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 ARID3BQ8IVW6 561 aaPredicted RBP18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 ZSCAN18Q8TBC5 510 aaPredicted RBP18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 HMCESQ96FZ2 354 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 CEP41Q9BYV8 373 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 FAM53CQ9NYF3 392 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 DONSONQ9NYP3 566 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 CLEC1BQ9P126 229 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 ANAPC5Q9UJX4 755 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 ZNF510Q9Y2H8 683 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms