RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 AHI1Q8N157 1196 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ATG16L2Q8NAA4 619 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 DNAJC9Q8WXX5 260 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PNMA5Q96PV4 448 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 BTBD9Q96Q07 612 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FDXACB1Q9BRP7 624 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 C2orf49Q9BVC5 232 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PRDM16Q9HAZ2 1276 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 NOD2Q9HC29 1040 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 WHRNQ9P202 907 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SUCOQ9UBS9 1254 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TRHDEQ9UKU6 1024 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 GPSM3Q9Y4H4 160 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ITSN1Q15811 1721 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CCT8L1PA6NM43 557 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 AGPSO00116 658 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 KRT75O95678 551 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 HNRNPCP07910 306 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 IL1R1P14778 569 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MYL12AP19105 171 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SREBF1P36956 1147 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CCDC153Q494R4 210 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 R3HCC1LQ7Z5L2 792 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TRAPPC5Q8IUR0 188 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FAM20CQ8IXL6 584 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 HJURPQ8NCD3 748 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 DNAJB3Q8WWF6 145 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FTHL17Q9BXU8 183 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 RBM12Q9NTZ6 932 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 AP3M1Q9Y2T2 418 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CCDC85CA6NKD9 419 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 HSMCR30P0CW71 290 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MMP13P45452 471 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SNRPD1P62314 119 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 NTRK3Q16288 839 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PDPK2PQ6A1A2 396 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 RAET1GQ6H3X3 334 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 BHLHB9Q6PI77 547 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 KRT73Q86Y46 540 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 FAM136AQ96C01 138 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CPNE1Q99829 537 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ERP44Q9BS26 406 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 HDHD2Q9H0R4 259 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ATAD3AQ9NVI7 634 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SMPD4Q9NXE4 827 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MRPL39Q9NYK5 338 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 DMGDHQ9UI17 866 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SCAF8Q9UPN6 1271 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ALG6Q9Y672 507 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ERI2A8K979 691 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SEC22BO75396 215 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CSF1RP07333 972 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CXCL8P10145 99 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 OTUD4Q01804 1114 aaKnown RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 PCBP1Q15365 356 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 GJC2Q5T442 439 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 TMEM154Q6P9G4 183 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CREG2Q8IUH2 290 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ARID3BQ8IVW6 561 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-202ENST00000356435 CPA6Q8N4T0 437 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 MS4A14Q96JA4 679 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 APOL4Q9BPW4 351 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 RHBGQ9H310 441 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 NEUROD4Q9HD90 331 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 GPATCH2LQ9NWQ4 482 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF510Q9Y2H8 683 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 SNX13Q9Y5W8 968 aa5.64□□□□□ -1.51
PTPRD-202ENST00000356435 A0A087X1B8 175 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 FAM205CA6NFA0 338 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 ANKDD1BA6NHY2 528 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 MED24O75448 989 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 INSRRP14616 1297 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 RPA3P35244 121 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-202ENST00000356435 MAPKAPK2P49137 400 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 PLIN5Q00G26 463 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 SERPINA13PQ6UXR4 307 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 RPTNQ6XPR3 784 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 BTN2A1Q7KYR7 527 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 APTXQ7Z2E3 356 aaKnown RBP5.63□□□□□ -1.51
PTPRD-202ENST00000356435 FAM131BQ86XD5 332 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 SETD9Q8NE22 299 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 REPS2Q8NFH8 660 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 ZIM3Q96PE6 472 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 SENP6Q9GZR1 1112 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF304Q9HCX3 659 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 TAS2R13Q9NYV9 303 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 TAGLN3Q9UI15 199 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 MRPS23Q9Y3D9 190 aaKnown RBP5.63□□□□□ -1.51
PTPRD-202ENST00000356435 GAKO14976 1311 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 HACD1B0YJ81 288 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 RAD51CO43502 376 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 JCHAINP01591 159 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 STAT5AP42229 794 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 STK4Q13043 487 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 TRIM16LQ309B1 348 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 C11orf91Q3C1V1 193 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 FGD3Q5JSP0 725 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 FAXCQ5TGI0 409 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 LYPLAL1Q5VWZ2 237 aa5.63□□□□□ -1.51
PTPRD-202ENST00000356435 ESRP1Q6NXG1 681 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms