RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 SPOCD1Q6ZMY3 1216 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 USP49Q70CQ1 688 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 ANKRD52Q8NB46 1076 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 LEMD2Q8NC56 503 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 PPP1R10Q96QC0 940 aaKnown RBP11.48□□□□□ -0.57
FN1-204ENST00000356005 OSBPL10Q9BXB5 764 aa11.48□□□□□ -0.57
FN1-204ENST00000356005 OR1D2P34982 312 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 C16orf87Q6PH81 154 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 KAT2BQ92831 832 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 REXO5Q96IC2 774 aaKnown RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 LRRC1Q9BTT6 524 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 OSBPL1AQ9BXW6 950 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 ZNF536O15090 1300 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 CNTRLQ7Z7A1 2325 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 FYNP06241 537 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 GSTM1P09488 218 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 HNRNPH2P55795 449 aaKnown RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 IL2P60568 153 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 NCF4Q15080 339 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 NR6A1Q15406 480 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 BTNL9Q6UXG8 535 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 NPAS4Q8IUM7 802 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 MCOLN2Q8IZK6 566 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 TTLL2Q9BWV7 592 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 SH3BP4Q9P0V3 963 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 BTBD7Q9P203 1132 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 UBIAD1Q9Y5Z9 338 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 ITGB4P16144 1822 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 TRIM49D1C9J1S8 452 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 ARHGEF9O43307 516 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 CHGBP05060 677 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 ELFN1P0C7U0 828 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 GRK2P25098 689 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 RBM43Q6ZSC3 357 aaKnown RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 DPP10Q8N608 796 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 ZSCAN18Q8TBC5 510 aaPredicted RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 EME1Q96AY2 570 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 AVENQ9NQS1 362 aaPredicted RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 PAPOLBQ9NRJ5 636 aaKnown RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 VTI1BQ9UEU0 232 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 OR12D3Q9UGF7 316 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 LGR5O75473 907 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 KLK7P49862 253 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 KCNMB4Q86W47 210 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 GPSM1Q86YR5 675 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 HDDC3Q8N4P3 179 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 OR56A4Q8NGH8 313 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 FAIM2Q9BWQ8 316 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 ABI3Q9P2A4 366 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 SIGLEC16A6NMB1 481 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 ZNF185O15231 689 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 OR10H2O60403 315 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 RPSAP08865 295 aaKnown RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 CLTBP09497 229 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 PEX5P50542 639 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 LRRC14Q15048 493 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 PRMT9Q6P2P2 845 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 SLC44A2Q8IWA5 706 aaPredicted RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 FBXO39Q8N4B4 442 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 ELOVL2Q9NXB9 296 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 MRTO4Q9UKD2 239 aaKnown RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 AIM2O14862 343 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 RGS14O43566 566 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 FDPSP14324 419 aaKnown RBP11.47□□□□□ -0.57
FN1-204ENST00000356005 DEFB106AQ8N104 65 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 CYP2W1Q8TAV3 490 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 OLFM3Q96PB7 478 aa11.47□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3DA0A087WVF3 549 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3IA0A087WXS9 549 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3EA0A087X179 549 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3KA0A087X1G2 549 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3FA6NER0 549 aaPredicted RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 LRRC72A6NJI9 287 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3LB9A6J9 549 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3HP0C7X1 549 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 GRM5P41594 1212 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 USP4Q13107 963 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3GQ6DHY5 549 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3CQ6IPX1 549 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 ZFPM1Q8IX07 1006 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TBC1D3Q8IZP1 549 aaPredicted RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 TIFAQ96CG3 184 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 PABPC3Q9H361 631 aaKnown RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 ALG13Q9NP73 1137 aaKnown RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 USP15Q9Y4E8 981 aaPredicted RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 CICQ96RK0 1608 aaPredicted RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 TRIP11Q15643 1979 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TLR5O60602 858 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 OR6A2O95222 327 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 NOS3P29474 1203 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 NTSP30990 170 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 ELP6Q0PNE2 266 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 VGLL2Q8N8G2 317 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 ZFP28Q8NHY6 868 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 KAZALD1Q96I82 304 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TRIM51Q9BSJ1 452 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 EFCAB1Q9HAE3 211 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms