RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 NFKB1P19838 968 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 SESN2P58004 480 aaPredicted RBP26.3■■□□□ 1.8
CLK2-201ENST00000355560 MPP2Q14168 576 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 LRRC14Q15048 493 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 CASC4Q6P4E1 433 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 TMEM199Q8N511 208 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 GSDMBQ8TAX9 411 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 STAMBPL1Q96FJ0 436 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 CCT8L2Q96SF2 557 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 HERC2P3Q9BVR0 1158 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 IKBKGQ9Y6K9 419 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 DOCK4Q8N1I0 1966 aa26.3■■□□□ 1.8
CLK2-201ENST00000355560 NYNRINQ9P2P1 1898 aaKnown RBP26.3■■□□□ 1.8
CLK2-201ENST00000355560 ARHGAP42A6NI28 874 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 ABLIM3O94929 683 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 AP2A1O95782 977 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 FAM107AO95990 144 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 C1QAP02745 245 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 IFNAR2P48551 515 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 CRADDP78560 199 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 SLC44A1Q8WWI5 657 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 ZNF512Q96ME7 567 aaPredicted RBP26.29■■□□□ 1.8
CLK2-201ENST00000355560 CYP4F11Q9HBI6 524 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 SDR42E2A6NKP2 422 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 WASH4PA8MWX3 477 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 MAFKO60675 156 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 HSPA8P11142 646 aaKnown RBP26.29■■□□□ 1.8
CLK2-201ENST00000355560 RING1Q06587 406 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 OLIG2Q13516 323 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 RAP1GAP2Q684P5 730 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 TFAP2DQ7Z6R9 452 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 USP33Q8TEY7 942 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 SMC6Q96SB8 1091 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 YME1L1Q96TA2 773 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 ZYG11BQ9C0D3 744 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 MLXIPLQ9NP71 852 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 SPG21Q9NZD8 308 aa26.29■■□□□ 1.8
CLK2-201ENST00000355560 A0A1W2PPM1 405 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 TRDMT1O14717 391 aaKnown RBP26.28■■□□□ 1.8
CLK2-201ENST00000355560 URODP06132 367 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 INHBAP08476 426 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 CCNB1P14635 433 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 PRKCHP24723 683 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 MGAT1P26572 445 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 CCT5P48643 541 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 AFMIDQ63HM1 303 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 TPGS2Q68CL5 300 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 CTAGE3PQ8IX95 158 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 C4orf33Q8N1A6 199 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 DYDC1Q8WWB3 177 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 PPARGC1AQ9UBK2 798 aaKnown RBP26.28■■□□□ 1.8
CLK2-201ENST00000355560 PCDHA11Q9Y5I1 949 aa26.28■■□□□ 1.8
CLK2-201ENST00000355560 OTOP2Q7RTS6 562 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 CNTD1Q8N815 330 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 PDZD8Q8NEN9 1154 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 CDK5RAP1Q96SZ6 601 aaKnown RBP26.27■■□□□ 1.8
CLK2-201ENST00000355560 MLPHQ9BV36 600 aaPredicted RBP26.27■■□□□ 1.8
CLK2-201ENST00000355560 NKIRAS1Q9NYS0 192 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 HSFX1Q9UBD0 423 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 ERI2A8K979 691 aaKnown RBP26.27■■□□□ 1.8
CLK2-201ENST00000355560 USP12O75317 370 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 SPAG7O75391 227 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 SUN1O94901 812 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 RHOQP17081 205 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 DNAJB2P25686 324 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 ALFQ53S48 1182 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 KCTD11Q693B1 232 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 FBXL22Q6P050 247 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 LRRC6Q86X45 466 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 PPM1NQ8N819 430 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 ZNF473Q8WTR7 871 aaKnown RBP26.27■■□□□ 1.8
CLK2-201ENST00000355560 MZB1Q8WU39 189 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 FNIP2Q9P278 1114 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 YIPF1Q9Y548 306 aa26.27■■□□□ 1.8
CLK2-201ENST00000355560 IGLV3-10A0A075B6K4 115 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 FAM47DPA6NHR8 397 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 KPNA1P52294 538 aaPredicted RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 HNRNPH2P55795 449 aaKnown RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 NUGGCQ68CJ6 796 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 TRMT10BQ6PF06 316 aaKnown RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 DDX53Q86TM3 631 aaKnown RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 OR52K1Q8NGK4 314 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 AUTS2Q8WXX7 1259 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 ARNTL2Q8WYA1 636 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 CHMP6Q96FZ7 201 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 ZNF419Q96HQ0 510 aaPredicted RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 NACA2Q9H009 215 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 CCDC134Q9H6E4 229 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 SYBUQ9NX95 663 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 PTPRSQ13332 1948 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 CXorf49A8MYA2 514 aaPredicted RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 CNTN5O94779 1100 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 CSH1P0DML2 217 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 CSH2P0DML3 217 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 HMGA1P17096 107 aaKnown RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 ATP5C1P36542 298 aaKnown RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 PAPOLAP51003 745 aaKnown RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 TIGD7Q6NT04 549 aaPredicted RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 TAX1BP1Q86VP1 789 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 OVCA2Q8WZ82 227 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms