RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CATSPERGQ6ZRH7 1159 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 PIK3R5Q8WYR1 880 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 WNT8BQ93098 351 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 EPS8L2Q9H6S3 715 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 CATSPERZQ9NTU4 200 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 AGRPO00253 132 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 FASP25445 335 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 ZNF135P52742 658 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 CXorf40AQ8TE69 158 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 TMEM134Q9H6X4 195 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 A0A088AWK7 358 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 TISP43B9A030 160 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 SLC9A3R1O14745 358 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 PGK1P00558 417 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 ZNF10P21506 573 aaPredicted RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 NOS2P35228 1153 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 PLK1P53350 603 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 CBWD6Q4V339 395 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 PRMT9Q6P2P2 845 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 CASP12Q6UXS9 341 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 MAGEC3Q8TD91 643 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 UROC1Q96N76 676 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 OR12D3Q9UGF7 316 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 H0YC42 278 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 DDX3XO00571 662 aaKnown RBP eCLIP18.34■□□□□ 0.537e-30■□□□□ 10
COL18A1-202ENST00000355480 OASLQ15646 514 aaKnown RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 TRIM16LQ309B1 348 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 GATAD2AQ86YP4 633 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 GPSM1Q86YR5 675 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 WDR36Q8NI36 951 aaKnown RBP18.34■□□□□ 0.53
COL18A1-202ENST00000355480 USP6NLQ92738 828 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 HGH1Q9BTY7 390 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 ADGRA3Q8IWK6 1321 aa18.34■□□□□ 0.53
COL18A1-202ENST00000355480 ATG7O95352 703 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 CYP3A4P08684 503 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 SMIM10L2AP0DMW4 78 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 SMIM10L2BP0DMW5 78 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 PTPN4P29074 926 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 HPCAL1P37235 193 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 FGD3Q5JSP0 725 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 HECTD3Q5T447 861 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 RAP1GAP2Q684P5 730 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 MARK2Q7KZI7 788 aaKnown RBP18.33■□□□□ 0.53
COL18A1-202ENST00000355480 EPHX4Q8IUS5 362 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 RHBGQ9H310 441 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 THAP1Q9NVV9 213 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 CARNS1A5YM72 827 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 APOC4-APOC2K7ER74 178 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 RGS14O43566 566 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 APOC2P02655 101 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 PIK3CGP48736 1102 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 MRPS6P82932 125 aaKnown RBP18.33■□□□□ 0.53
COL18A1-202ENST00000355480 C16orf72Q14CZ0 275 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 KIAA0319LQ8IZA0 1049 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 CLYBLQ8N0X4 340 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 STK40Q8N2I9 435 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 MTFMTQ96DP5 389 aaKnown RBP18.33■□□□□ 0.53
COL18A1-202ENST00000355480 TMEM51Q9NW97 253 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 ENTPD4Q9Y227 616 aa18.33■□□□□ 0.53
COL18A1-202ENST00000355480 SCAMP3O14828 347 aaKnown RBP18.33■□□□□ 0.52
COL18A1-202ENST00000355480 INHBEP58166 350 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 TMEM199Q8N511 208 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 ADPRHL2Q9NX46 363 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 F8VP50 259 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 INPP4BO15327 924 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 FGF10O15520 208 aaPredicted RBP18.33■□□□□ 0.52
COL18A1-202ENST00000355480 ADCY6O43306 1168 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 FAM20BO75063 409 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 ZCCHC18P0CG32 403 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 CCR4P51679 360 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 ZC3H12AQ5D1E8 599 aaKnown RBP18.33■□□□□ 0.52
COL18A1-202ENST00000355480 SYT12Q8IV01 421 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 TMEM132CQ8N3T6 1108 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 CAVIN3Q969G5 261 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 RNFT2Q96EX2 444 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 NINJ2Q9NZG7 142 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 DNMT3LQ9UJW3 386 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 UMPSP11172 480 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 DGKAP23743 735 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 TALDO1P37837 337 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 GNA13Q14344 377 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 ADRM1Q16186 407 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 EID3Q8N140 333 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 CORO1BQ9BR76 489 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 LIMD1Q9UGP4 676 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 FAM50BQ9Y247 325 aa18.33■□□□□ 0.52
COL18A1-202ENST00000355480 USP32Q8NFA0 1604 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 SF3B1O75533 1304 aaKnown RBP eCLIP18.32■□□□□ 0.521e-6■■■■■ 72.5
COL18A1-202ENST00000355480 UNC93AQ86WB7 457 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 FAM126AQ9BYI3 521 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-202ENST00000355480 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 DIP2CQ9Y2E4 1556 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 FAM25AB3EWG3 89 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 FAM25CB3EWG5 89 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 FAM25GB3EWG6 89 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 VPS4BO75351 444 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 CTNNB1P35222 781 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 CCL23P55773 120 aa18.32■□□□□ 0.52
COL18A1-202ENST00000355480 ACSM2AQ08AH3 577 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms