RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PPP1R36Q96LQ0 422 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 COX16Q9P0S2 106 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 NOX1Q9Y5S8 564 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 CSADQ9Y600 493 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 WDR90Q96KV7 1748 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 TRIP11Q15643 1979 aa9.6□□□□□ -0.87
SMG6-202ENST00000354901 KANSL1LA0AUZ9 987 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 ADM5C9JUS6 153 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 CILPO75339 1184 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 INSRRP14616 1297 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 GRIA1P42261 906 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 NEK2P51955 445 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 CRADDP78560 199 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 MYBPC1Q00872 1141 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 MBTD1Q05BQ5 628 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 INAQ16352 499 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 CCDC142Q17RM4 750 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 GOLGA7BQ2TAP0 167 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 CELF3Q5SZQ8 465 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 CASC4Q6P4E1 433 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 TTC30AQ86WT1 665 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 RIOX2Q8IUF8 465 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 CXorf38Q8TB03 319 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 AGR3Q8TD06 166 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 CAPSLQ8WWF8 208 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 EBF4Q9BQW3 602 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 MRPS26Q9BYN8 205 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 CEP41Q9BYV8 373 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 LHX5Q9H2C1 402 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 EBF1Q9UH73 591 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 SNX9Q9Y5X1 595 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 F8W8V4 182 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 CASQ2O14958 399 aaPredicted RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 ZNF286BP0CG31 522 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 CSE1LP55060 971 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 NOMO1Q15155 1222 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 ANO4Q32M45 955 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 TRMT10BQ6PF06 316 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 UNC5BQ8IZJ1 945 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 MZB1Q8WU39 189 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 ZC3H15Q8WU90 426 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 NLRP7Q8WX94 980 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 DCPSQ96C86 337 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 CNPY3Q9BT09 278 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 OSBPL6Q9BZF3 934 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 SEMA6AQ9H2E6 1030 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 FZD8Q9H461 694 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 XAB2Q9HCS7 855 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 PTPRHQ9HD43 1115 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 TUBA8Q9NY65 449 aaPredicted RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 SLC17A6Q9P2U8 582 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 N6AMT1Q9Y5N5 214 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 PPEF2O14830 753 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 KLHL41O60662 606 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 DGKIO75912 1065 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 ETFBP38117 255 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 RAP1GDS1P52306 607 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 ZNF143P52747 638 aaPredicted RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 GNA12Q03113 381 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 KCTD2Q14681 263 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 TMEM132DQ14C87 1099 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 TRIM16LQ309B1 348 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 SLC10A6Q3KNW5 377 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 PMF1Q6P1K2 205 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 MPP5Q8N3R9 675 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 ZNF276Q8N554 614 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 TSPAN14Q8NG11 270 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 KIF12Q96FN5 646 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 ZFRQ96KR1 1074 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 NSMCE3Q96MG7 304 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 RNF157Q96PX1 679 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 BCO2Q9BYV7 579 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 DHX35Q9H5Z1 703 aaKnown RBP9.59□□□□□ -0.87
SMG6-202ENST00000354901 ARHGAP26Q9UNA1 814 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 HES2Q9Y543 173 aa9.59□□□□□ -0.87
SMG6-202ENST00000354901 SSC5DA1L4H1 1573 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 E7ESA3 106 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 MAGEC1O60732 1142 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 GMNNO75496 209 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 TGFB3P10600 412 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 THRAP10827 490 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 ARF4P18085 180 aaPredicted RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 YWHAZP63104 245 aaKnown RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 CCNIQ14094 377 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 CHI3L2Q15782 390 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 USP50Q70EL3 339 aaPredicted RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 PLD5Q8N7P1 536 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMG6-202ENST00000354901 FNIP1Q8TF40 1166 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 CLEC4CQ8WTT0 213 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 SLC44A1Q8WWI5 657 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 GFM2Q969S9 779 aaKnown RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 MCRS1Q96EZ8 462 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 APOPT1Q96IL0 206 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 VPS50Q96JG6 964 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 SNRNP25Q9BV90 132 aaKnown RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 NUF2Q9BZD4 464 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 KCNK13Q9HB14 408 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 PCDH12Q9NPG4 1184 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms