RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 FAM153CQ494X1 144 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 C4orf22Q6V702 233 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 HTR3DQ70Z44 454 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 CFAP52Q8N1V2 620 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 CAVIN3Q969G5 261 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 PRICKLE1Q96MT3 831 aaPredicted RBP16.01■□□□□ 0.15
CTSA-202ENST00000354880 GDAP1L1Q96MZ0 367 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 ADAM7Q9H2U9 754 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 FAM153AQ9UHL3 310 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 ANAPC5Q9UJX4 755 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 TPX2Q9ULW0 747 aaKnown RBP16.01■□□□□ 0.15
CTSA-202ENST00000354880 ZNF510Q9Y2H8 683 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 MRPS23Q9Y3D9 190 aaKnown RBP16.01■□□□□ 0.15
CTSA-202ENST00000354880 ZFP37Q9Y6Q3 630 aaPredicted RBP16.01■□□□□ 0.15
CTSA-202ENST00000354880 SHROOM3Q8TF72 1996 aa16■□□□□ 0.15
CTSA-202ENST00000354880 XIRP2A4UGR9 3374 aa16■□□□□ 0.15
CTSA-202ENST00000354880 LEFTY2O00292 366 aa16■□□□□ 0.15
CTSA-202ENST00000354880 TRDMT1O14717 391 aaKnown RBP16■□□□□ 0.15
CTSA-202ENST00000354880 NDC80O14777 642 aa16■□□□□ 0.15
CTSA-202ENST00000354880 SCAMP3O14828 347 aaKnown RBP16■□□□□ 0.15
CTSA-202ENST00000354880 STK10O94804 968 aaKnown RBP16■□□□□ 0.15
CTSA-202ENST00000354880 OR1E1P30953 314 aa16■□□□□ 0.15
CTSA-202ENST00000354880 RPS24P62847 133 aaKnown RBP16■□□□□ 0.15
CTSA-202ENST00000354880 PCGF5Q86SE9 256 aa16■□□□□ 0.15
CTSA-202ENST00000354880 LRRC49Q8IUZ0 686 aa16■□□□□ 0.15
CTSA-202ENST00000354880 ATPAF2Q8N5M1 289 aa16■□□□□ 0.15
CTSA-202ENST00000354880 CCDC110Q8TBZ0 833 aa16■□□□□ 0.15
CTSA-202ENST00000354880 SMG9Q9H0W8 520 aaKnown RBP16■□□□□ 0.15
CTSA-202ENST00000354880 NOL6Q9H6R4 1146 aaKnown RBP16■□□□□ 0.15
CTSA-202ENST00000354880 MTRF1LQ9UGC7 380 aaKnown RBP16■□□□□ 0.15
CTSA-202ENST00000354880 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.99■□□□□ 0.15
CTSA-202ENST00000354880 MTSS1O43312 755 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 CLDN11O75508 207 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 GLP2RO95838 553 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 CEBPBP17676 345 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 CCNCP24863 283 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 TNNT3P45378 269 aaPredicted RBP15.99■□□□□ 0.15
CTSA-202ENST00000354880 CDH4P55283 916 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 HYAL1Q12794 435 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 TCEAL5Q5H9L2 206 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 TTC39BQ5VTQ0 682 aaPredicted RBP15.99■□□□□ 0.15
CTSA-202ENST00000354880 HIBCHQ6NVY1 386 aaPredicted RBP15.99■□□□□ 0.15
CTSA-202ENST00000354880 RHBDF2Q6PJF5 856 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 TMEM184AQ6ZMB5 413 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 CCDC13Q8IYE1 715 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 DEPDC1BQ8WUY9 529 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 TSGA13Q96PP4 275 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 TDP1Q9NUW8 608 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 SEPT10Q9P0V9 454 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 CCL26Q9Y258 94 aa15.99■□□□□ 0.15
CTSA-202ENST00000354880 A0A0A0MRY4 1105 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 KCNK1O00180 336 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 RNF103O00237 685 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 TSPAN3O60637 253 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 RAMP2O60895 175 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 PAPOLAP51003 745 aaKnown RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 SGSHP51688 502 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 BASP1P80723 227 aaKnown RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 WASHC5Q12768 1159 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 MORF4L2Q15014 288 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 ANKRD20A2Q5SQ80 823 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 RARS2Q5T160 578 aaKnown RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 RNASEH2BQ5TBB1 312 aaKnown RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 ANKRD20A1Q5TYW2 823 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 ANKRD20A3Q5VUR7 823 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 FAM217AQ8IXS0 508 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 EFHBQ8N7U6 833 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 SH3RF2Q8TEC5 729 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 ING5Q8WYH8 240 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 USP13Q92995 863 aaPredicted RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 SPATA13Q96N96 652 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 ZNF446Q9NWS9 450 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 C2orf16Q68DN1 1984 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 MYO18AQ92614 2054 aaKnown RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 A0A1B0GVM2 712 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 E2F8A0AVK6 867 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 TCAF2A6NFQ2 919 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 ARHGAP42A6NI28 874 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 RASA4BC9J798 803 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 RASA4O43374 803 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 MAFKO60675 156 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 OPHN1O60890 802 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 YBEYP58557 167 aaPredicted RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 POLD3Q15054 466 aaPredicted RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 LRIT3Q3SXY7 679 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 PARP15Q460N3 678 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 ARHGAP36Q6ZRI8 547 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 ARHGEF18Q6ZSZ5 1173 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 CHST9Q7L1S5 443 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 BBS7Q8IWZ6 715 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 PPIL6Q8IXY8 311 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 TAB3Q8N5C8 712 aaPredicted RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 ITFG1Q8TB96 612 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 CPT1BQ92523 772 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 ZSWIM3Q96MP5 696 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 RAB6BQ9NRW1 208 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 SHOC2Q9UQ13 582 aa15.98■□□□□ 0.15
CTSA-202ENST00000354880 FARP1Q9Y4F1 1045 aaPredicted RBP15.98■□□□□ 0.15
CTSA-202ENST00000354880 NYNRINQ9P2P1 1898 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms