RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 DDIT4Q9NX09 232 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 LRCH1Q9Y2L9 728 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 IPPQ9Y573 584 aa20.02■□□□□ 0.8
COL13A1-201ENST00000354547 A0A088AWK7 358 aa20.02■□□□□ 0.79
COL13A1-201ENST00000354547 RBM47A0AV96 593 aaKnown RBP20.02■□□□□ 0.79
COL13A1-201ENST00000354547 ABCE1P61221 599 aaKnown RBP20.02■□□□□ 0.79
COL13A1-201ENST00000354547 ZRSR2Q15696 482 aaKnown RBP20.02■□□□□ 0.79
COL13A1-201ENST00000354547 PDPK2PQ6A1A2 396 aa20.02■□□□□ 0.79
COL13A1-201ENST00000354547 NPWQ8N729 165 aa20.02■□□□□ 0.79
COL13A1-201ENST00000354547 BFARQ9NZS9 450 aa20.02■□□□□ 0.79
COL13A1-201ENST00000354547 ZNF212Q9UDV6 495 aa20.02■□□□□ 0.79
COL13A1-201ENST00000354547 ANGPTL2Q9UKU9 493 aa20.02■□□□□ 0.79
COL13A1-201ENST00000354547 RRN3P2A6NIE6 340 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 HSPA4LO95757 839 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 ADRA1BP35368 520 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 GARSP41250 739 aaKnown RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 AFF1P51825 1210 aaKnown RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 TRMT5Q32P41 509 aaKnown RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 NAPRTQ6XQN6 538 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 ZNF781Q8N8C0 355 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 SLC26A7Q8TE54 656 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 FAM136AQ96C01 138 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 GDAP2Q9NXN4 497 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 NDE1Q9NXR1 346 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 TRIP12Q14669 1992 aaPredicted RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 NEMP1O14524 444 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 LIN7AO14910 233 aaPredicted RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 CPOXP36551 454 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 CCR10P46092 362 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 COPAP53621 1224 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 ACTR3P61158 418 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 BEX3Q00994 111 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 TCHHL1Q5QJ38 904 aaPredicted RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 RNF220Q5VTB9 566 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 ZNF184Q99676 751 aaPredicted RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 HNRNPABQ99729 332 aaKnown RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 C20orf96Q9NUD7 363 aaPredicted RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 DDX43Q9NXZ2 648 aaKnown RBP20.01■□□□□ 0.79
COL13A1-201ENST00000354547 GTF2IRD1Q9UHL9 959 aa20.01■□□□□ 0.79
COL13A1-201ENST00000354547 A0A096LPK6 155 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 FYNP06241 537 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 CD1EP15812 388 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 MX2P20592 715 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 GLRBP48167 497 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 CACNA2D1P54289 1103 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 AP2B1P63010 937 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 CUL3Q13618 768 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 RABGAP1LQ5R372 815 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 ABHD16BQ9H3Z7 469 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 IARS2Q9NSE4 1012 aaKnown RBP20■□□□□ 0.79
COL13A1-201ENST00000354547 ZSWIM8A7E2V4 1837 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 AP1G2O75843 785 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 ZCCHC18P0CG32 403 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 AVPR1AP37288 418 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 DPYSQ14117 519 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 NAIF1Q69YI7 327 aaPredicted RBP20■□□□□ 0.79
COL13A1-201ENST00000354547 RAPH1Q70E73 1250 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 CYS1Q717R9 158 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 PSTKQ8IV42 348 aaKnown RBP20■□□□□ 0.79
COL13A1-201ENST00000354547 GORASP1Q9BQQ3 440 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 LRRC40Q9H9A6 602 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 TMEM30AQ9NV96 361 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 SLC39A10Q9ULF5 831 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 DCLK1O15075 740 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 FAM200BP0CF97 657 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 AOC1P19801 751 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 NFKB1P19838 968 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 EPHX2P34913 555 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 PNPLA4P41247 253 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 RPL34P49207 117 aaKnown RBP20■□□□□ 0.79
COL13A1-201ENST00000354547 ZBTB17Q13105 803 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 UBXN11Q5T124 520 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 CPNE1Q99829 537 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 COG4Q9H9E3 785 aa20■□□□□ 0.79
COL13A1-201ENST00000354547 MYBPHLA2RUH7 354 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 XPOTO43592 962 aaKnown RBP19.99■□□□□ 0.79
COL13A1-201ENST00000354547 JCHAINP01591 159 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 MYL3P08590 195 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 SPRP35270 261 aaPredicted RBP19.99■□□□□ 0.79
COL13A1-201ENST00000354547 BPTFQ12830 3046 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 C9orf131Q5VYM1 1079 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 KDELC2Q7Z4H8 507 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 CCNJLQ8IV13 435 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 SPNS2Q8IVW8 549 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 DEFB107AQ8IZN7 70 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 NRCAMQ92823 1304 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 RNF34Q969K3 372 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 NAT9Q9BTE0 207 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 EIF2B3Q9NR50 452 aaKnown RBP19.99■□□□□ 0.79
COL13A1-201ENST00000354547 RCOR3Q9P2K3 495 aaPredicted RBP19.99■□□□□ 0.79
COL13A1-201ENST00000354547 BRCA2P51587 3418 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 SHROOM3Q8TF72 1996 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 KLHL2O95198 593 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 LTFP02788 710 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 SRGAP2BP0DMP2 458 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 SP100P23497 879 aaPredicted RBP19.99■□□□□ 0.79
COL13A1-201ENST00000354547 SCNN1AP37088 669 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 ANKRD20A4Q4UJ75 823 aa19.99■□□□□ 0.79
COL13A1-201ENST00000354547 SLC9B1Q4ZJI4 515 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms