RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 FZD4Q9ULV1 537 aa16.39■□□□□ 0.21
PDGFA-201ENST00000354513 CHD5Q8TDI0 1954 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 COL27A1Q8IZC6 1860 aaPredicted RBP16.38■□□□□ 0.21
PDGFA-201ENST00000354513 TYW5A2RUC4 315 aaKnown RBP16.38■□□□□ 0.21
PDGFA-201ENST00000354513 CBX4O00257 560 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 PLK4O00444 970 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 THAP12O43422 761 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 RNASEH2AO75792 299 aaKnown RBP16.38■□□□□ 0.21
PDGFA-201ENST00000354513 APOEP02649 317 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 PDGFRAP16234 1089 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 SLC8A1P32418 973 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 GRK6P43250 576 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 YWHAZP63104 245 aaKnown RBP16.38■□□□□ 0.21
PDGFA-201ENST00000354513 CENPCQ03188 943 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 PRAMEF14Q5SWL7 426 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 IRF2BP1Q8IU81 584 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 CCAR2Q8N163 923 aaKnown RBP16.38■□□□□ 0.21
PDGFA-201ENST00000354513 OR2T34Q8NGX1 318 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 THAP9Q9H5L6 903 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 CCDC86Q9H6F5 360 aaKnown RBP16.38■□□□□ 0.21
PDGFA-201ENST00000354513 NCKAP1Q9Y2A7 1128 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 IGSF10Q6WRI0 2623 aa16.38■□□□□ 0.21
PDGFA-201ENST00000354513 BAHCC1Q9P281 2608 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 ARID1BQ8NFD5 2236 aaPredicted RBP16.37■□□□□ 0.21
PDGFA-201ENST00000354513 CAPN9O14815 690 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 TNFSF14O43557 240 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 CCR5P51681 352 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 PLK1P53350 603 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 C19orf48Q6RUI8 117 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 GATAD2AQ86YP4 633 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 DEFB106AQ8N104 65 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 GANCQ8TET4 914 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 SHC3Q92529 594 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 SIX2Q9NPC8 291 aa16.37■□□□□ 0.21
PDGFA-201ENST00000354513 FAM149AA5PLN7 773 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 F5H5T6 163 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 I6L893 689 aaPredicted RBP16.36■□□□□ 0.21
PDGFA-201ENST00000354513 MED7O43513 233 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 APC2O95996 2303 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 GGCXP38435 758 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 COL9A2Q14055 689 aaPredicted RBP16.36■□□□□ 0.21
PDGFA-201ENST00000354513 SUZ12Q15022 739 aaKnown RBP16.36■□□□□ 0.21
PDGFA-201ENST00000354513 SMAD1Q15797 465 aaKnown RBP16.36■□□□□ 0.21
PDGFA-201ENST00000354513 ARHGAP44Q17R89 818 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 ARTNQ5T4W7 220 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 FBXL22Q6P050 247 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 FAM183BPQ6ZVS7 135 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 PASD1Q8IV76 773 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 ATP6V0D2Q8N8Y2 350 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 SMG1Q96Q15 3661 aaKnown RBP16.36■□□□□ 0.21
PDGFA-201ENST00000354513 ELF4Q99607 663 aaPredicted RBP16.36■□□□□ 0.21
PDGFA-201ENST00000354513 OMDQ99983 421 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 TRIM62Q9BVG3 475 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 ACE2Q9BYF1 805 aaPredicted RBP16.36■□□□□ 0.21
PDGFA-201ENST00000354513 ANLNQ9NQW6 1124 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.36■□□□□ 0.21
PDGFA-201ENST00000354513 ARHGAP20Q9P2F6 1191 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 DKK4Q9UBT3 224 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 SARDHQ9UL12 918 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 PCDHGC3Q9UN70 934 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 RAXQ9Y2V3 346 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 OR51B4Q9Y5P0 310 aa16.36■□□□□ 0.21
PDGFA-201ENST00000354513 A0A1B0GVM2 712 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 TCAF2A6NFQ2 919 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 LRRC72A6NJI9 287 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 LATO43561 262 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 RNASEH1O60930 286 aaKnown RBP16.35■□□□□ 0.21
PDGFA-201ENST00000354513 GRAP2O75791 330 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 MOCS3O95396 460 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 ADH1BP00325 375 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 ERBB2P04626 1255 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 PNMA6AP0CW24 399 aaPredicted RBP16.35■□□□□ 0.21
PDGFA-201ENST00000354513 GOT1P17174 413 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 C5AR1P21730 350 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 CLDN6P56747 220 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 SLC12A1Q13621 1099 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 ELAVL3Q14576 367 aaKnown RBP16.35■□□□□ 0.21
PDGFA-201ENST00000354513 COL28A1Q2UY09 1125 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 OLFML1Q6UWY5 402 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 DHRS13Q6UX07 377 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 SND1Q7KZF4 910 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDGFA-201ENST00000354513 ENOSF1Q7L5Y1 443 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 KANSL1Q7Z3B3 1105 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 ADAT2Q7Z6V5 191 aaKnown RBP16.35■□□□□ 0.21
PDGFA-201ENST00000354513 C14orf80Q86SX3 495 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 SAP25Q8TEE9 199 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 ASNSD1Q9NWL6 643 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 DDIT4Q9NX09 232 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 APEX2Q9UBZ4 518 aa16.35■□□□□ 0.21
PDGFA-201ENST00000354513 TDRD6O60522 2096 aaKnown RBP16.35■□□□□ 0.21
PDGFA-201ENST00000354513 SYNJ2BP-COX16A0A087WUM0 186 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 TFE3P19532 575 aaPredicted RBP16.34■□□□□ 0.21
PDGFA-201ENST00000354513 CD38P28907 300 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
PDGFA-201ENST00000354513 C21orf59P57076 290 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 PTPN20Q4JDL3 420 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 TTC39BQ5VTQ0 682 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms