RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ACADSBP45954 432 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 PHC1P78364 1004 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 OCA2Q04671 838 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 PRKG1Q13976 671 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 PTK2BQ14289 1009 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 KRT39Q6A163 491 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 IQSEC1Q6DN90 963 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 C16orf86Q6ZW13 317 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 KCTD1Q719H9 257 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 SLC22A16Q86VW1 577 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 CBWD2Q8IUF1 395 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 EXOC8Q8IYI6 725 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 MINDY2Q8NBR6 621 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 FBXL20Q96IG2 436 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 IL12RB2Q99665 862 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 ADI1Q9BV57 179 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 HMG20AQ9NP66 347 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 TCF7L2Q9NQB0 619 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 IP6K2Q9UHH9 426 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 NUP98P52948 1817 aa13.52□□□□□ -0.24
IFT88-202ENST00000351808 TAF4O00268 1085 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 DLGAP1O14490 977 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 NRP1O14786 923 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 ZBTB5O15062 677 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 PLIN3O60664 434 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 GLDCP23378 1020 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 HIBADHP31937 336 aaKnown RBP13.52□□□□□ -0.25
IFT88-202ENST00000351808 IFNA8P32881 189 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 GMPRP36959 345 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 PRKAA2P54646 552 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 TMBIM6P55061 237 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 COPZ1P61923 177 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 LRIT3Q3SXY7 679 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 UGT3A1Q6NUS8 523 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 PRR23BQ6ZRT6 265 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.25
IFT88-202ENST00000351808 CCDC60Q8IWA6 550 aaPredicted RBP13.52□□□□□ -0.25
IFT88-202ENST00000351808 RP9Q8TA86 221 aaKnown RBP13.52□□□□□ -0.25
IFT88-202ENST00000351808 NPAS2Q99743 824 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 SLC7A5P2Q9GIP4 190 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 RMND5AQ9H871 391 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 NEK6Q9HC98 313 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 ZNF229Q9UJW7 825 aa13.52□□□□□ -0.25
IFT88-202ENST00000351808 ERVV-1B6SEH8 477 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 C9IYK1 514 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 RALBP11234 206 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 NAT2P11245 290 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 PRKCHP24723 683 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 RPS6P62753 249 aaKnown RBP13.51□□□□□ -0.25
IFT88-202ENST00000351808 YWHAZP63104 245 aaKnown RBP13.51□□□□□ -0.25
IFT88-202ENST00000351808 RHDQ02161 417 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 ZNF252P-AS1Q0IIN9 211 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 CEP78Q5JTW2 689 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 PLEKHG7Q6ZR37 379 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 CBR4Q8N4T8 237 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 PDPRQ8NCN5 879 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 OR13F1Q8NGS4 319 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 CXorf38Q8TB03 319 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 FAM110BQ8TC76 370 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 CYGBQ8WWM9 190 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 NACC1Q96RE7 527 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 ATP13A3Q9H7F0 1226 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 SATB2Q9UPW6 733 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 GPR25O00155 361 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 CCRL2O00421 344 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 CYP19A1P11511 503 aaPredicted RBP13.51□□□□□ -0.25
IFT88-202ENST00000351808 NME5P56597 212 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
IFT88-202ENST00000351808 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 MERTKQ12866 999 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 SMTNL2Q2TAL5 461 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 NATD1Q8N6N6 113 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 PIGBQ92521 554 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 SNX19Q92543 992 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 STRA6Q9BX79 667 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 FANCEQ9HB96 536 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 TRPC5Q9UL62 973 aaPredicted RBP13.51□□□□□ -0.25
IFT88-202ENST00000351808 CNOT6Q9ULM6 557 aaKnown RBP13.51□□□□□ -0.25
IFT88-202ENST00000351808 PCDHA1Q9Y5I3 950 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 PCDHAC2Q9Y5I4 1007 aa13.51□□□□□ -0.25
IFT88-202ENST00000351808 E2F8A0AVK6 867 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 TRIM38O00635 465 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 TBX3O15119 743 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 TMEM191BP0C7N4 346 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 HARS2P49590 506 aaKnown RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 NLRP11P59045 1033 aaKnown RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 TUBA1BP68363 451 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 STILQ15468 1287 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 TUBA1AQ71U36 451 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 DCP2Q8IU60 420 aaKnown RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 PCDH20Q8N6Y1 951 aaKnown RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 FBXL13Q8NEE6 735 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 FNIP1Q8TF40 1166 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 ZFP90Q8TF47 636 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 ZUFSPQ96AP4 578 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 FAF2Q96CS3 445 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 FBXL18Q96ME1 805 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms